Gene PputGB1_1388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_1388 
Symbol 
ID5869152 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp1553557 
End bp1555386 
Gene Length1830 bp 
Protein Length609 aa 
Translation table11 
GC content54% 
IMG OID641546491 
Producthypothetical protein 
Protein accessionYP_001667631 
Protein GI167032400 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.210626 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACGCCG CACGTGGTCA GTGGGTTGAT TTCACCATCG GCCACAATGA CCTGGCATTT 
GGCATTCAAA ATGACTGGGA GACGCCAGCG GCCTGCGACC TTGAAGAGAT CAAGCTTTAT
TTCAAAGGGC AACCTAAGGC AGAAGGCTCC ACGCTGGAAA TCGAGCGCCT GACCTGCTGG
CACGAAAGCG AGGCGCCAAC GGCGTGGCTG ACGGAAGGTT TTGCAAGAGA GCCTCTTTCC
GAAGCGCTCT GTGATTCGCT GTATGCCTAC ATGGAAAAGT GCTTCAAAGA TGTGCCGGCT
CAAGCTAATG ACTATCTGCA GAAAGGCGTA TGCCCGCTCT ACGGAAATAT TGGCCTGGAT
TGGGACTGGC AACAGACTCT GCCAGATGAG CTGAGTGCTG TTGGCACCTA CCGCTTCTCG
TGGCATTCGC TGCACCCCGC AATCATTCTG ATGCTGCATG CACGGAATGA GGGGAGCGTA
GCGCCTCTTT TCCCGGCTCG GGAGTTCATC AGCAACTGGC TGGAACGCAG CTATTTCAAT
GCTGATGAAG ACCGGAAGTT TGCCTGGTAT GACCACGGTA CCGCCGAGCG CTTGCTGGCA
TTCTTGTTGA TCTGGGATAT CGGCGTTCGC CAGCAGTTCG AGCACCGCTT CATGGTTCGT
CTGCGCTCAG CCATCTTCAA GCATGCCCAG TTGCTGGCAT CGGAAATGTT CTACGCCTCT
CACCAGGCGT CGCGCTACCA CAACCATGCA TGGTTCCAGG ACATGGCACT GCTGGCGACC
AGCCTGGCCA TGCCCGACTT CCCGTGCTCC GAACGCTGGC AAACGCTGGC CTTGTCCCGC
CTGACCGATC AGCTTGATAC GCTGATTGTT CGCGACAACG GCTATGCCGT GTTCGTTGAA
AACTCCATCG GCTATCACCA GGGTGTACAG CGCCTGATAG CCTTCGCCGG TGAACTGGCA
CAGCAAAGTT CGCACGATAC GACCATCCCA ACGGTTGCAG AAGAACTGCT CAAGTTTTCC
GACTTTTTGC GCTACCCAGA TAACCGTTCC CCAGCCCAGG GCGATACCTT CCGTCGCGCC
AACCCCGACC TGGAAACGGT ACGCAACAGC AAGAATTACC CAACGACATC GGCAACGATT
CTGCCAACGG CTGGCTACGC AATTATCAAA GGTAATCACG CGCAAACTGC TTACATGCTA
ACCATGTTTG CAACGTCGCT GTGCAAAACC CACAAGCATC AAGACAACTT GTCCTTTACG
TTGTTCATGG ACGGTATCGA GTGGCTCATC GACCCGAGCT TCTACTCGCA CGAGTATGTA
AAGCCTGTCC AGAGCTTCTT GAGGGGGGCC TACTCGCACA ACAATCCGGT TATCGGTGAC
GTGCCTTACA GCATCGAACC TGGCCACGCC CGGTTGTCCG GAGACGTCAT CGAAAATAGC
TTCAGCTTGA ATGGCTCGCA TGACGCGTTT GAGAACACGT TAATTAAACG CAGCATCAAC
GGTTATCTCG ATCGCCTGCA GCTTGATATC AGCGACGAAA TCCATGCAAC GCTGACAGAC
AAGCCTATGT TCAGCCTGTT CCACTGCGGT GACGGCACTC AGGTAACCAA GAGTCAAGAG
GGTGTGGAAA TTCGTCACCC CGCGTCCAAC TATCGAATTA CAATCGCTTC AAACTGCCCC
TGCACGATCG TCACAGGCTG GAACGATGAT CAACTTGTGA AAGGCATCAG CGGCGTTGGC
TTTATGCAGC AAATTGACAC GTCGATGGTT GCATTTGAAA TGAAGAACGC TACGACAGCG
CAATTCACTA TTACTGCTCA CCACAACTGA
 
Protein sequence
MNAARGQWVD FTIGHNDLAF GIQNDWETPA ACDLEEIKLY FKGQPKAEGS TLEIERLTCW 
HESEAPTAWL TEGFAREPLS EALCDSLYAY MEKCFKDVPA QANDYLQKGV CPLYGNIGLD
WDWQQTLPDE LSAVGTYRFS WHSLHPAIIL MLHARNEGSV APLFPAREFI SNWLERSYFN
ADEDRKFAWY DHGTAERLLA FLLIWDIGVR QQFEHRFMVR LRSAIFKHAQ LLASEMFYAS
HQASRYHNHA WFQDMALLAT SLAMPDFPCS ERWQTLALSR LTDQLDTLIV RDNGYAVFVE
NSIGYHQGVQ RLIAFAGELA QQSSHDTTIP TVAEELLKFS DFLRYPDNRS PAQGDTFRRA
NPDLETVRNS KNYPTTSATI LPTAGYAIIK GNHAQTAYML TMFATSLCKT HKHQDNLSFT
LFMDGIEWLI DPSFYSHEYV KPVQSFLRGA YSHNNPVIGD VPYSIEPGHA RLSGDVIENS
FSLNGSHDAF ENTLIKRSIN GYLDRLQLDI SDEIHATLTD KPMFSLFHCG DGTQVTKSQE
GVEIRHPASN YRITIASNCP CTIVTGWNDD QLVKGISGVG FMQQIDTSMV AFEMKNATTA
QFTITAHHN