| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1377 |
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| Symbol | |
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| ID | 5869141 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 1539609 |
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| End bp | 1540574 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641546480 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_001667620 |
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| Protein GI | 167032389 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.824049 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.00256302 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAACCGCC GTGTATTTCT CACCGGAGCG AGTGGCTTTG TGGGCAGTGC CGTATTGCAC
AGGCTGTTGG CAGACGGCAT GCCAACTGTG GCCACGGTGC GTGGCAGCAG CCTGTCACTA
CCGCCCGCTG TACAGGCAGT GCCCTTCGAT TCGTTCGAGG AAGCAGGCCA ATGGGGCGAG
GCGTTGCGCG GCTGCGACAC GGTTATTCAT TGCGCAGCCC GTGTTCATGT GATGAATGAT
ACAGAGGCCG ACCCACTTTC TGCATTTCGC AAGGTCAATG TGCAGGGCAC CATGAACCTT
GCCCGGCAAG CTGTCGCAGC AGGGGTGAAG CGCTTCGTCT TTATCAGTTC GATCAAGGTC
AATGGCGAGG GAACTGCACC TGGGCAGCCC TACACCGCGC ACGACCGCCC GCAACCTCAA
GACCCGTATG GCATCTCCAA GATGGAGGCG GAGGCCCAAT TGCTGGCTTT GGCGCAAGCG
TCCGGGCTGG AAGTCGTGAT CATACGGCCG GTGCTGGTGT ATGGCCCTGG GGTCAAAGCG
AACTTCCAGG CCATGATGCG TTGGTTGAAC AAGGGCGTGC CGTTGCCATT TGGGGCCATC
GACAATCGTC GGAGCCTGGT TGCACTCGAC AATCTGGTAG ACCTGATAGT GACCTGTACC
GATCACCCGG CGGCTGTAAA CCAGGTGTTT CTGGTTAGCG ACGGTGAGGA CCTTTCCACT
ACTGCGTTGC TACGCCGCAT GGCCCAGGCA TTGGGCGCGC CGGCGCGATT GCTACCCGTA
CCTGGCTGGG TCCTCAGCGG CGGAGCCAAC CTGTTGGGCC GTACGGCGTT GTCCAAAAGA
TTATGCGGGT CATTGCAGGT GGATATCGAA AAAACGCGTA AGGTACTTGG CTGGCGACCG
CCGGTGAGTG TCGATGCCGC GCTCAGGGCG ACTGCGCAAC ATTTTCAGGA ATCGTCGAAC
AAATGA
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| Protein sequence | MNRRVFLTGA SGFVGSAVLH RLLADGMPTV ATVRGSSLSL PPAVQAVPFD SFEEAGQWGE
ALRGCDTVIH CAARVHVMND TEADPLSAFR KVNVQGTMNL ARQAVAAGVK RFVFISSIKV
NGEGTAPGQP YTAHDRPQPQ DPYGISKMEA EAQLLALAQA SGLEVVIIRP VLVYGPGVKA
NFQAMMRWLN KGVPLPFGAI DNRRSLVALD NLVDLIVTCT DHPAAVNQVF LVSDGEDLST
TALLRRMAQA LGAPARLLPV PGWVLSGGAN LLGRTALSKR LCGSLQVDIE KTRKVLGWRP
PVSVDAALRA TAQHFQESSN K
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