| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1367 |
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| Symbol | |
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| ID | 5869131 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 1527518 |
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| End bp | 1528951 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641546470 |
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| Product | beta-lactamase domain-containing protein |
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| Protein accession | YP_001667610 |
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| Protein GI | 167032379 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1236] Predicted exonuclease of the beta-lactamase fold involved in RNA processing |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.00267628 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGAATATC CCAGCCTTTC CCATCACGGT GGTACCCGCG GCGTCACCGG GTCTTGCCAC
CAGTTGCACG TCGATCCGTC AACCAGCCTG TTGATCGACT GCGGCCTGGA GCAGGGAAGC
GAAGCGGCGC CGGGTGCGGA AAGCGCGGCG CTCGGCTTCG ACATTCAGGG TATCCGGGCT
CTGGTTATCA CCCACGTACA TCTCGACCAC GTTGGTCGAA TCCCGGCGCT GCTTGCCGCC
GGCTATCGCG GCCCCATCCT GTGTAGCGAG CCCTCAGCCC GGCTGCTGCC GTTGGTGCTG
GAAGATGCCT ACAAACTGAC CATCAGCAGT GAGCCTGCGC AGGTGGCGCG GTATATCGAT
TTTATTCGTG ACCTTATCGT GCCGCTGCCT TTCGAGCAGT GGCACACGTT GGTTGAGCAT
CCCGGCCTTG GCTGCCGCAT TCGCTTGCAG CGCGCAGGCC ATCTGTTGGG CTCGGCTTAT
GTCGAGTGCG ACATGCAGCA TGGGCAATCC AACAGCCGTT ATGTGTTCTC CGGCGACCTG
GGTGCGTGTG GTAACCCCTT GCTGCGTCCG GTTCAGCCAC CAGAGCGTGC TGATGTGCTC
GTACTGGAAA GTACCTATGG CGACCGCCTG CATTCGCATG TCGACGACCG TAGGCGGCGG
CTGGAAGATG CCATTGATCG CGCCCTCGCC GACAAGGGCA CTATTCTGAT CCCTGCATTC
AGTCTTGGTC GCACTCAAGA AGTGCTGTTT GAGCTGGAAG ATATCCTGCA CCGCAAGGCA
CTACTGGGCA CAGCCGGTCC AGCCCCTGAT GGTGAGCCGA TCGACTGGTC CCAGTTGCCC
ATCATCCTCG ACTCGCCTCT GGCTCAGCGC ATCACCAGCG TTTACCGGGA GCTGCACGAA
TACTGGAATG ACGAGGCCAG GGCGCGTGTT GCTGAAGGGC GTGATCCGCT CGGCTTCAGT
CAGCTGATCA GCGTGGATAC CCATGCTCGC CACCAGCAGG TGGTCAACTA CCTCAAGAGT
ACCGGTCGCC CGGCGATTGT GATTGCCGGC AATGGCATGT GCTCGGGTGG GCGTATCGTC
AATTACCTCA AGGCCATGCT GGCAGATCCG CGGCATGAGG TGATGTTTGT GGGCTATCAG
GCCAAGGGTA CGCCGGGGGC GGTGATACAG GCTAGCGAAG GGGCGGAAGG GTTTGTGCAG
GTTGATCTGG ATGGGCGGAT GTATGAGGTG CATCTCAAGG TTAGGACGAT CGCTGGCTTT
GCAGGGCATG CAGATCAATT GGGGCTTGTA AGGTTCGCCC TCCAGGGGCG GTCGCCAGCG
CGGCAAATAC TGCTTGTACA TGGTGAGGCA GGCGCCAAAC ACCTGCTGGC AAGGGCATTA
CGCAATGATG CTGCTTGTTC GAGCGTCATG CCGGAAGTTG GTATACCAAG ATAG
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| Protein sequence | MEYPSLSHHG GTRGVTGSCH QLHVDPSTSL LIDCGLEQGS EAAPGAESAA LGFDIQGIRA
LVITHVHLDH VGRIPALLAA GYRGPILCSE PSARLLPLVL EDAYKLTISS EPAQVARYID
FIRDLIVPLP FEQWHTLVEH PGLGCRIRLQ RAGHLLGSAY VECDMQHGQS NSRYVFSGDL
GACGNPLLRP VQPPERADVL VLESTYGDRL HSHVDDRRRR LEDAIDRALA DKGTILIPAF
SLGRTQEVLF ELEDILHRKA LLGTAGPAPD GEPIDWSQLP IILDSPLAQR ITSVYRELHE
YWNDEARARV AEGRDPLGFS QLISVDTHAR HQQVVNYLKS TGRPAIVIAG NGMCSGGRIV
NYLKAMLADP RHEVMFVGYQ AKGTPGAVIQ ASEGAEGFVQ VDLDGRMYEV HLKVRTIAGF
AGHADQLGLV RFALQGRSPA RQILLVHGEA GAKHLLARAL RNDAACSSVM PEVGIPR
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