Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_1364 |
Symbol | |
ID | 5869128 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 1525866 |
End bp | 1526318 |
Gene Length | 453 bp |
Protein Length | 150 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 641546467 |
Product | hypothetical protein |
Protein accession | YP_001667607 |
Protein GI | 167032376 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1943] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.0968684 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.0104776 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCCTCC ACGGCCATAG ACTCCGCCAT GCCCGATGCT CGGTGCCAGG CAGGCTTTAC ATGCTGACAA CTGTAACCCA CCTGCGTCAG CCCCTGTTCC ACAACCTTCA CCATGCCCGC TTGACAATCC ACAACCTACG CCATGCAGAT CAGCAGCAGC ACTGCCGCTC GCTCGCCTGG GTACTGATGC CAGACCATTT GCACTGGTTG ATCGAATTGA AAGACACGAC GCTTAGTAAA CTGATGCAAC GCTTCAAGTG CCAATCCAGC AATGCATTGC GCCAAGCCGG GGTGAAGATG TTGCCGATAT GGCAGGCCGG ATATTACGAC CGCGCATTGC GCCGAGACGA AGATATTCTC AAGGCTGCAA GGTATATCGT GGCAAACCCG ATCAGGGCGG GGTTAGTTAG CAGAGCTGGT GATTACCCGC ATTGGGATGC GGTGTGGCTT TGA
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Protein sequence | MPLHGHRLRH ARCSVPGRLY MLTTVTHLRQ PLFHNLHHAR LTIHNLRHAD QQQHCRSLAW VLMPDHLHWL IELKDTTLSK LMQRFKCQSS NALRQAGVKM LPIWQAGYYD RALRRDEDIL KAARYIVANP IRAGLVSRAG DYPHWDAVWL
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