| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1361 |
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| Symbol | |
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| ID | 5869125 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 1520973 |
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| End bp | 1523213 |
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| Gene Length | 2241 bp |
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| Protein Length | 746 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641546464 |
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| Product | bifunctional cyclohexadienyl dehydrogenase/ 3-phosphoshikimate 1-carboxyvinyltransferase |
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| Protein accession | YP_001667604 |
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| Protein GI | 167032373 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0128] 5-enolpyruvylshikimate-3-phosphate synthase
[COG0287] Prephenate dehydrogenase |
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| TIGRFAM ID | [TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.290163 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0329548 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTAAATG CAGCAAAAAC CAAACCCGCA CCAATCATCA ACCGCTTGGT CGTGGTCGGC
CTCGGCCTGA TCGGTGGCTC GTTCGCCAAG GGCCTGCGTG AAAGCGGCCT GTGCCGGGAA
GTGGTCGGGG TCGACCTGGA TGCCCCTTCG CGCAAGCAGG CCGTGGCCCT GGGCGTGGTC
GACCGCTGCG AAGAAGACCT GGCTGCTGCC TGTGTCGGTG CCGATGTCAT CCAGCTGGCC
GTGCCAATCC TGGCCATGGA GAAAGTCCTG GCCCGCTTGG CCCAGCTCGA CCTGGGTGAT
GCGATCATCA CCGACGTCGG CAGTGCCAAG GGCAACGTCG TTCGTGAGGC GCGCGCCGTT
TTCGGGCAGC GCCTGCCACG CTTCGTTCCA GGCCATCCCA TCGCCGGCTC CGAGCAAAGC
GGGGTAGAGG CCTCAAACGC CACCCTGTTC CGTCGGCACA AGGTGATTCT CACGCCGCTG
GTCGAAACCG ACCCGGCGGC GCTGGCCTTG GTCGACCGCC TGTGGCGTGC GCTGGATGCC
GACGTGGAGC ACATGTCGGT CGAGCGCCAT GATGAAGTGC TGGCCGCCAC CAGTCATCTG
CCGCACCTGC TGGCCTTTGG CTTGGTCGAT TCGCTGGCCA AGCGCAATGA AAACCTCGAG
ATCTTCCGGT ACGCTGCGGG AGGCTTCCGC GATTTCACAA GAATCGCCGG CAGCGACCCG
ACCATGTGGC ACGACATCTT CCTCGCCAAC CGCGACGCTG TCCTGCGCAC GCTTGATACA
TATCGCAGCG ATCTCGACGC CTTGCGCGAC GCGATCGCTG AAGGGGACGG GCACCAACTG
CTGGGTGTAT TCACCCGCGC TCGGGTTGCC CGCGAGCATT TCAGTAAAAT CCTGGCCCGC
CGGGCCTATG TGGACGCTAT GAACGCCAAC GATCTGATTT TCCTGGCCCA ACCGGGTGGC
CGCCTGAACG GGCGGATTCG CGTACCGGGC GACAAGTCGA TTTCTCACCG CTCGATCATG
CTCGGCTCGC TGGCCGAAGG CACTACCGAG GTCGAAGGCT TCCTCGAGGG TGAAGACGCG
CTGGCGACCT TGCAGGCATT CCGTGACATG GGTGTGGTCA TCGAAGGCCC CAACCATGGT
CGAGTGACCA TTCATGGTGT CGGCCTGCAT GGCCTCAAGC CGCCGCCTGG CCCGCTGTAT
GTGGGTAACT CCGGTACTTC GATGCGCCTG CTGTCGGGCC TGTTGGCCGG TCAGTCGTTC
GACGTGACCA TGACGGGCGA CGCCTCGCTG TCCAAGCGCC CGATGAACCG TGTGGCCAAC
CCGCTGCGCG AAATGGGTGC CGTGGTCGAG ACCGGCCCGG AAGGCCGCCC GCCGCTGACC
ATCCGTGGTG GCCACAAGCT CAAGGGGCTG ACCTACACGC TGCCGATGGC CAGCGCCCAG
GTCAAATCCT GCCTGCTGCT GGCTGGCCTG TACGCCGAAG GCAAGACCAC TGTCACCGAG
CCTGCGCCTA CCCGTGACCA CACCGAGCGC ATGCTGCGTG GTTTCGGCTA TTCGGTCGAA
AGCAACGGCC CGGTCGCTTC GCTGCAGTCC GGCGGCAAAC TGACCGCTAC CCGCATCGAA
GTGCCGGCCG ACATTTCCTC GGCGGCGTTC TTCCTGGTGG CAGCTTCTAT CGCCGAAGGC
TCCGAGTTGG TGCTGGAGCA CGTTGGCATC AACCCGACCC GTACCGGCGT AATCGACATT
CTGCGCCTGA TGGGTGGCGA CATCACCCTG GAAAACCAGC GTGAAGTCGG CGGCGAGCCA
GTGGCCGACC TGCGTGTGCG CGGTGCCCAG CTCAAAGGTA TCGATATTCC AGAAGCGTTG
GTGCCGCTGG CCATCGACGA ATTCCCGGTG CTGTTCGTCG CGGCTGCATG CGCTGAAGGG
CGCACAGTGC TACGTGGCGC CGAAGAGCTG CGGGTGAAGG AGTCCGACCG CATCCAGGTC
ATGGCTGACG GCCTGATCAC GCTGGGAATC AAGTGCGAGC CGACCCCGGA CGGCATCATC
ATCGACGGCG GCCAGTTGGG CGGCGGCGAA GTACACGGGC ATGGTGACCA CCGCATCGCC
ATGGCCTTCA GCGTAGCCTC GCTGCGCGCC AGTGCGCCGA TCCGCATCCA CGACTGCGCC
AACGTCGCCA CCTCGTTCCC CAACTTCCTG GCACTGTGCG CCGAAGTGGG CATCCGCGTG
GCGGAAGAGG GCAAGTCGTG A
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| Protein sequence | MVNAAKTKPA PIINRLVVVG LGLIGGSFAK GLRESGLCRE VVGVDLDAPS RKQAVALGVV
DRCEEDLAAA CVGADVIQLA VPILAMEKVL ARLAQLDLGD AIITDVGSAK GNVVREARAV
FGQRLPRFVP GHPIAGSEQS GVEASNATLF RRHKVILTPL VETDPAALAL VDRLWRALDA
DVEHMSVERH DEVLAATSHL PHLLAFGLVD SLAKRNENLE IFRYAAGGFR DFTRIAGSDP
TMWHDIFLAN RDAVLRTLDT YRSDLDALRD AIAEGDGHQL LGVFTRARVA REHFSKILAR
RAYVDAMNAN DLIFLAQPGG RLNGRIRVPG DKSISHRSIM LGSLAEGTTE VEGFLEGEDA
LATLQAFRDM GVVIEGPNHG RVTIHGVGLH GLKPPPGPLY VGNSGTSMRL LSGLLAGQSF
DVTMTGDASL SKRPMNRVAN PLREMGAVVE TGPEGRPPLT IRGGHKLKGL TYTLPMASAQ
VKSCLLLAGL YAEGKTTVTE PAPTRDHTER MLRGFGYSVE SNGPVASLQS GGKLTATRIE
VPADISSAAF FLVAASIAEG SELVLEHVGI NPTRTGVIDI LRLMGGDITL ENQREVGGEP
VADLRVRGAQ LKGIDIPEAL VPLAIDEFPV LFVAAACAEG RTVLRGAEEL RVKESDRIQV
MADGLITLGI KCEPTPDGII IDGGQLGGGE VHGHGDHRIA MAFSVASLRA SAPIRIHDCA
NVATSFPNFL ALCAEVGIRV AEEGKS
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