| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1356 |
|---|
| Symbol | |
|---|
| ID | 5869120 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | - |
|---|
| Start bp | 1513597 |
|---|
| End bp | 1514295 |
|---|
| Gene Length | 699 bp |
|---|
| Protein Length | 232 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641546459 |
|---|
| Product | 3-demethylubiquinone-9 3-methyltransferase |
|---|
| Protein accession | YP_001667599 |
|---|
| Protein GI | 167032368 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase |
|---|
| TIGRFAM ID | [TIGR01983] ubiquinone biosynthesis O-methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 0.818542 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 0.836315 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAACG TCGACCGCGC CGAAATCGCC AAGTTCGAAG CGCTGGCCCA CCGCTGGTGG
GACCGCGAAA GCGAGTTCAA GCCGCTGCAC GAAATCAACC CGCTGCGCGT CAACTGGATC
GACGAGCGGG CCAGCCTGGC CGGCAAGAAA GTGCTGGACG TAGGCTGTGG CGGCGGCATC
CTCAGCGAAG CCATGGCCCT GCGCGGCGCC ACGGTCACCG GTATCGACAT GGGCGAGGCA
CCGCTGGCAG TGGCCCAACT GCATCAGCTG GAGTCGGGCG TGCAGGTGGA ATACCGGCAG
ATCACCGCCG AAGCGCTGGC CGAGGAAATG CCTGAACAGT TCGACGTGGT CACCTGCCTT
GAAATGCTCG AGCACGTGCC CGACCCGTCT TCGGTGATTC GCGCCTGCTA CCGCATGGTC
AAGCCTGGCG GCCAGGTGTT CTTCTCCACC ATCAACCGCA ACCCCAAGGC CTACCTGCTG
GCCATCGTCG GCGCCGAATA CATTCTGAAA ATGCTGCCGC GCGGCACCCA TGACTTCAAG
AAGTTCATCC GCCCGTCCGA GCTGGGTGCC TGGAGCCGCG ATGCCGGCCT GCAGGTAAAG
GACATCATCG GCCTCACCTA CAACCCGCTG ACCAAGCACT ACAAGCTCAA CAGCGACGTC
GACGTCAACT ACATGATCCA GACCCTGCGC GAGGAATAA
|
|---|
| Protein sequence | MSNVDRAEIA KFEALAHRWW DRESEFKPLH EINPLRVNWI DERASLAGKK VLDVGCGGGI
LSEAMALRGA TVTGIDMGEA PLAVAQLHQL ESGVQVEYRQ ITAEALAEEM PEQFDVVTCL
EMLEHVPDPS SVIRACYRMV KPGGQVFFST INRNPKAYLL AIVGAEYILK MLPRGTHDFK
KFIRPSELGA WSRDAGLQVK DIIGLTYNPL TKHYKLNSDV DVNYMIQTLR EE
|
|---|
| |