Gene PputGB1_1347 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_1347 
Symbol 
ID5869111 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp1504307 
End bp1504831 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content61% 
IMG OID641546450 
Producthypothetical protein 
Protein accessionYP_001667590 
Protein GI167032359 
COG category[S] Function unknown 
COG ID[COG3184] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.363787 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGTC TCCGTGTCCT TTGTGCCGCC GTTGCCCTGG TTTGCGCCAG CGGCCAGGTA 
CTCGCTGCCA CCGCCAGCCA CAACGCTGCT GCCGAGAAAT TCCTGACCCT GGCCAACGCC
GACAAGCTGG GCACCCCGGT GTACATGCAA GTACAGCAAA TGTTCGCCCA GCGTTTCGCC
CAGACCAAGG CCCCGGCCGC CAAACAGCCG GTACTGGAAA GCTACCAGGC CAAGGCCAAC
GCGGCACTGG ACAACGCCAT CGGCTGGAAC AAGCTGAAGC CGAAGATGGT CGACCTGTAC
ACCCAGACCT TCACCGAGCA GGAGCTCAAG GACCTGGTCA AGTTCTATGA ATCGCCACTG
GGCAAGAAAG TGCTGCGTGA AATGCCCAAG GTTACCCAGC AGTCGGCGCA GCTGACCCAA
CAGAGCCTGG AACCAGCAGT GCCGGTGGTG AACAAGCTGC TGGAAGACAT GACCAAGGAA
CTGGACCCGA ACGCAGGCAA GGCCGCCGCC CCTGCGAAGA AGTGA
 
Protein sequence
MTRLRVLCAA VALVCASGQV LAATASHNAA AEKFLTLANA DKLGTPVYMQ VQQMFAQRFA 
QTKAPAAKQP VLESYQAKAN AALDNAIGWN KLKPKMVDLY TQTFTEQELK DLVKFYESPL
GKKVLREMPK VTQQSAQLTQ QSLEPAVPVV NKLLEDMTKE LDPNAGKAAA PAKK