Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_1347 |
Symbol | |
ID | 5869111 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 1504307 |
End bp | 1504831 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641546450 |
Product | hypothetical protein |
Protein accession | YP_001667590 |
Protein GI | 167032359 |
COG category | [S] Function unknown |
COG ID | [COG3184] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.363787 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCGTC TCCGTGTCCT TTGTGCCGCC GTTGCCCTGG TTTGCGCCAG CGGCCAGGTA CTCGCTGCCA CCGCCAGCCA CAACGCTGCT GCCGAGAAAT TCCTGACCCT GGCCAACGCC GACAAGCTGG GCACCCCGGT GTACATGCAA GTACAGCAAA TGTTCGCCCA GCGTTTCGCC CAGACCAAGG CCCCGGCCGC CAAACAGCCG GTACTGGAAA GCTACCAGGC CAAGGCCAAC GCGGCACTGG ACAACGCCAT CGGCTGGAAC AAGCTGAAGC CGAAGATGGT CGACCTGTAC ACCCAGACCT TCACCGAGCA GGAGCTCAAG GACCTGGTCA AGTTCTATGA ATCGCCACTG GGCAAGAAAG TGCTGCGTGA AATGCCCAAG GTTACCCAGC AGTCGGCGCA GCTGACCCAA CAGAGCCTGG AACCAGCAGT GCCGGTGGTG AACAAGCTGC TGGAAGACAT GACCAAGGAA CTGGACCCGA ACGCAGGCAA GGCCGCCGCC CCTGCGAAGA AGTGA
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Protein sequence | MTRLRVLCAA VALVCASGQV LAATASHNAA AEKFLTLANA DKLGTPVYMQ VQQMFAQRFA QTKAPAAKQP VLESYQAKAN AALDNAIGWN KLKPKMVDLY TQTFTEQELK DLVKFYESPL GKKVLREMPK VTQQSAQLTQ QSLEPAVPVV NKLLEDMTKE LDPNAGKAAA PAKK
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