Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_1345 |
Symbol | |
ID | 5869109 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 1501750 |
End bp | 1502712 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641546448 |
Product | hypothetical protein |
Protein accession | YP_001667588 |
Protein GI | 167032357 |
COG category | [S] Function unknown |
COG ID | [COG2510] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.0815858 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACACCA CTTCCGGCCG CTGGGGCTAT GGGCTGTTCC TGGCGCTTCT GACGGCGCTG CTCTGGGGTA TCTTGCCGAT CAAGCTCAAG CAGGTGCTGC AAGTGGTCGA CCCGATCACC GTCACCTGGT ATCGCTTGTC GGTCTCCGGC GGCCTGCTGT TCGCCTGGCT GGCGGCTCAG CGGCGCTTGC CGTCCGTGCG CAAACTTACG CCCAAGGGCA AAGGCCTGGT GGTGCTGGCC GTGCTTGGCT TGATGGGTAA CTACGTGCTG TACCTGATCG GTCTCAAGCT GCTCAGCCCC GGCACCGCGC AACTGGTGGT GCAAATCGGC CCGGTGCTGT TACTGGTGGC CAGCGTATTC GTGTTCCGCG AGCGCTTCAG CCTGGGGCAG GGCGTGGGCC TGCTGATTCT GCTGGCGGGT TTTGGGCTGT TTTTCAACCA GCGCCTGGAA GAACTGCTGA CGTCGCTGGG CACCTACACC ACCGGGGTGC TGACTATCCT GCTGGCCACC AGCATCTGGG TGTTCTACGC CCTGAGCCAG AAGCAATTGC TGACCGTATG GCATTCGCAA CAGGTAATGA TGGTGATCTA CCTCAGTTGC GCCGCGCTGC TCACGCCTTG GGTGCACCCG CTGGAAGCGC TGCAACTGAC CCCAGTGCAA GGTTGGCTGC TGCTGGCCTG TTGCCTGAAT ACCCTGGTGG CCTATGGCGC GTTTGCCGAA GCGCTGGCGC ACTGGGAGGC GTCGCGAGTG AGTGCCACCC TGGCGCTGAC GCCGCTGGTG ACCTTTGTCG CGGTGGCGCT GGCGGCGGTG ATTTGGCCAG CGTACGTACA TGCCGAGGAC ATCAATGCCC TGGGCTATGT GGGAGCGGTA ACCGTGGTGT TCGGCTCGGC GGTGGTGGCG CTGGGGCCAT CGCTGGTGGC CGGGTGGCGG GCCCGCAAAG CGCGATTGGC CCAGGTTCAT TAA
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Protein sequence | MHTTSGRWGY GLFLALLTAL LWGILPIKLK QVLQVVDPIT VTWYRLSVSG GLLFAWLAAQ RRLPSVRKLT PKGKGLVVLA VLGLMGNYVL YLIGLKLLSP GTAQLVVQIG PVLLLVASVF VFRERFSLGQ GVGLLILLAG FGLFFNQRLE ELLTSLGTYT TGVLTILLAT SIWVFYALSQ KQLLTVWHSQ QVMMVIYLSC AALLTPWVHP LEALQLTPVQ GWLLLACCLN TLVAYGAFAE ALAHWEASRV SATLALTPLV TFVAVALAAV IWPAYVHAED INALGYVGAV TVVFGSAVVA LGPSLVAGWR ARKARLAQVH
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