| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1332 |
|---|
| Symbol | |
|---|
| ID | 5869096 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | - |
|---|
| Start bp | 1486191 |
|---|
| End bp | 1487759 |
|---|
| Gene Length | 1569 bp |
|---|
| Protein Length | 522 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641546435 |
|---|
| Product | beta (1-6) glucans synthase |
|---|
| Protein accession | YP_001667575 |
|---|
| Protein GI | 167032344 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG5309] Exo-beta-1,3-glucanase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.438077 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACCGCC CGATGCCCAG TTCTGCCCGC CTGCTGTTGC CGTTGTACCT GCTTGCCTGC
CTGTTGGCCC TGCTTGGGCT TGGAGGGCTC TGGTACGGGC TGGGTAAGCC GGTACACCTG
GCCGATGCGG CCAGCCCGAC GCACAAGCTG CAGTGCGCCT CGTACACGCC GTTCGACAAA
GACCAGTCAC CCTACGACCA GCCATTACAG CTGCGCCCGG CACGGATGGA CGCCGACCTT
GCTTTGCTGG CTGAGCGATT CCAGTGCATC CGCACCTATT CCATGAGCGG CCTTGAGGCA
ATCCCGGCGC TGGCACGCAA GCATGGCCTG AAGGTGATGT TGGGCGCCTG GGTCAACGCT
CACCCGGCCG ACACCGACAA GGAAATCGAC CTGCTGATCG CCACCGCCAA CGCCAACCCG
GATGTGGTCA GCGCGGTGAT CGTCGGCAAC GAGACACTGC TGCGCAAAGA GGTGACCGGT
GCACACCTGG CCAAGCTGAT CGCCCGAGTG AAGCAACAGG TCAAAGTGCC GGTGACCTAC
GCCGATGTCT GGGATTTCTG GCTGCAGCAC CCGCAGGTGG CACCGGCGGT GGACTTCCTG
ACCATCCACC TGCTGCCCTA CTGGGAGGAC GAACCGCGCG GCATCGACGA TGCCTTGGCC
CACGTTGCCG ACGTGCGCCG GGTGTTCGGC ACGCGCTTCG CGCCCAAGGA CATCCTGATC
GGCGAAACCG GCTGGCCCAG CGAAGGCCGC CAGCGCGAGA CCGCTGTGCC CAGCCGAGCC
AACGAGGCGC GCTTCATTCG CGGCTTTGTG GCCATGGCCG AAAGCAACGG CTGGCGCTAC
AACCTGATCG AAGCCTTCGA CCAGCCGTGG AAGCGTGCCA ACGAAGGTGC TGTAGGCGGT
TACTGGGGGC TTTACGATGC CGACCGGCAG GACAAGGGCG TGCTCGAAGG GCCGGTGAGC
AACCTGCATT ACTGGCCACA GTGGTTGCTG GCGAGTGCGG TGTTGATGTT GGTCATGTTG
ATGCTCGCCG GGCGCCCCGC GACTGTGCAG GCGGCAGTGT TGCTGCCACT GCTGGCGGCG
TTTGGCGCGG TTTGCCTGGG GCTGTGGGGC GAGTTGATGC GCACCCATGC ACGCTTTGTC
GGGGAGTGGG TGTGGGCGGT GGCACTGGCC GGGCTGAACC TGCTGGTATT GGCCCATGCG
CTGCTGGCCT TGGCGCAACG GGCCGGCTGG CGCGAACGTT TATTCGCCTG GCTGCAGGCG
CGGGCCGGCT GGCTGTTGCT GGCGGCGGGT TTTGCCGCAG CGGTGAGCAT GCTGGCGATG
GTGTTCGACC CGCGCTACCG CAGCTTCCCC AGCGCTGCGC TGGCGTTGCC GGCGCTGGTG
TATGTGCTGT GGCCGGTAAG GGCGCGGCGG GCGGAGGTGG CGCTGCTGGC GTTCATCGTC
GGCGCCGGGG TGGCGCCGCA GCTGTTCGTG GAAGGGCTGG AGAACCAGCA GGCCTTGATC
TGGGCGGTAG TGAGTGTGCT GATGACAGCA GCGTTGTGGC GGAGCTTGCG AATGACTCGA
AAAGCCTGA
|
|---|
| Protein sequence | MDRPMPSSAR LLLPLYLLAC LLALLGLGGL WYGLGKPVHL ADAASPTHKL QCASYTPFDK
DQSPYDQPLQ LRPARMDADL ALLAERFQCI RTYSMSGLEA IPALARKHGL KVMLGAWVNA
HPADTDKEID LLIATANANP DVVSAVIVGN ETLLRKEVTG AHLAKLIARV KQQVKVPVTY
ADVWDFWLQH PQVAPAVDFL TIHLLPYWED EPRGIDDALA HVADVRRVFG TRFAPKDILI
GETGWPSEGR QRETAVPSRA NEARFIRGFV AMAESNGWRY NLIEAFDQPW KRANEGAVGG
YWGLYDADRQ DKGVLEGPVS NLHYWPQWLL ASAVLMLVML MLAGRPATVQ AAVLLPLLAA
FGAVCLGLWG ELMRTHARFV GEWVWAVALA GLNLLVLAHA LLALAQRAGW RERLFAWLQA
RAGWLLLAAG FAAAVSMLAM VFDPRYRSFP SAALALPALV YVLWPVRARR AEVALLAFIV
GAGVAPQLFV EGLENQQALI WAVVSVLMTA ALWRSLRMTR KA
|
|---|
| |