Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_1327 |
Symbol | |
ID | 5869091 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 1481207 |
End bp | 1482142 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641546430 |
Product | lipid A biosynthesis lauroyl acyltransferase |
Protein accession | YP_001667570 |
Protein GI | 167032339 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1560] Lauroyl/myristoyl acyltransferase |
TIGRFAM ID | [TIGR02207] lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.582863 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACGCC CGCGTTTTCG TCCCTATTAC CTTCACCCCA AGTTCTGGGG CCTGTGGCTG GGCCTGGGCC TGCTGTGGCT GGTGGTCCAG TTGCCGTACC GGGTGCTGTT GAAAATCGGT GCCGCACTGG GTGCCGTGAT GTACCGCTTC GCCGGTGAGC GTCGGCGCAT CGCCGCGCGC AACCTGGAGC TGTGCTTCCC GGAACTGTCG GTCGACGAAC GGCAGCGTTT GCTCAAGGCC AACTTCGCCT CTACCGGCAT CGCCTTCTTC GAAATGGCCA TGAGCTGGTG GTGGCCCAAG GCCAGGCTCG CGCGCCTGGC CCATATCGAG GGGCTGGAGC ATCTGCAGGC CGCCCAGCAG GCGGGGCAGG GCGCCATCCT CATGGCGGTG CACTTCACCA CCCTGGAAAT CGGCGCCGCG CTGCTGGGCC AGCAGCACAC CATCGACGGC ATGTACCGCG AGCATGGCAA CGCGTTGTTC GATTTCATCC AGCGCAGCGG CCGTGAGCGG CATAACCTTG ACTCGCTGGC AGTGGAGCGC GAAGACGTGC GTGGCATGCT CAAGCTGCTG CGTTCGGGCC GGGCGATCTG GTACGCACCC GACCAGGACT ACGGCGCCAA ACAGAGCATT TTCGTGCCGC TGTTCGGCAT CCCCGCAGCC ACGGTAACCG CCACCACCAA GTTCGCCCGG CTGGGCAAGG CGCAGGTTAT TCCGTTCACC CAGAAGCGCC TGGAGGATGG CAGCGGCTAT CGTCTGGTAA TCCACCCGCC ACTGGCGGAT TTCCCAGGCG AAAGCGAAGA GGCCGACTGC CTGCGTATCA ACCAGTGGGT CGAGGGTGTG TTGCGCGAGT GTCCGGAGCA GTACCTGTGG GCGCACCGCC GGTTCAAGTC ACGGCCCGAG GGTGCACCAC GGCTGTATGA GAAGAAAAAG CGCTGA
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Protein sequence | MERPRFRPYY LHPKFWGLWL GLGLLWLVVQ LPYRVLLKIG AALGAVMYRF AGERRRIAAR NLELCFPELS VDERQRLLKA NFASTGIAFF EMAMSWWWPK ARLARLAHIE GLEHLQAAQQ AGQGAILMAV HFTTLEIGAA LLGQQHTIDG MYREHGNALF DFIQRSGRER HNLDSLAVER EDVRGMLKLL RSGRAIWYAP DQDYGAKQSI FVPLFGIPAA TVTATTKFAR LGKAQVIPFT QKRLEDGSGY RLVIHPPLAD FPGESEEADC LRINQWVEGV LRECPEQYLW AHRRFKSRPE GAPRLYEKKK R
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