Gene PputGB1_1327 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_1327 
Symbol 
ID5869091 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp1481207 
End bp1482142 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content65% 
IMG OID641546430 
Productlipid A biosynthesis lauroyl acyltransferase 
Protein accessionYP_001667570 
Protein GI167032339 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1560] Lauroyl/myristoyl acyltransferase 
TIGRFAM ID[TIGR02207] lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.582863 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACGCC CGCGTTTTCG TCCCTATTAC CTTCACCCCA AGTTCTGGGG CCTGTGGCTG 
GGCCTGGGCC TGCTGTGGCT GGTGGTCCAG TTGCCGTACC GGGTGCTGTT GAAAATCGGT
GCCGCACTGG GTGCCGTGAT GTACCGCTTC GCCGGTGAGC GTCGGCGCAT CGCCGCGCGC
AACCTGGAGC TGTGCTTCCC GGAACTGTCG GTCGACGAAC GGCAGCGTTT GCTCAAGGCC
AACTTCGCCT CTACCGGCAT CGCCTTCTTC GAAATGGCCA TGAGCTGGTG GTGGCCCAAG
GCCAGGCTCG CGCGCCTGGC CCATATCGAG GGGCTGGAGC ATCTGCAGGC CGCCCAGCAG
GCGGGGCAGG GCGCCATCCT CATGGCGGTG CACTTCACCA CCCTGGAAAT CGGCGCCGCG
CTGCTGGGCC AGCAGCACAC CATCGACGGC ATGTACCGCG AGCATGGCAA CGCGTTGTTC
GATTTCATCC AGCGCAGCGG CCGTGAGCGG CATAACCTTG ACTCGCTGGC AGTGGAGCGC
GAAGACGTGC GTGGCATGCT CAAGCTGCTG CGTTCGGGCC GGGCGATCTG GTACGCACCC
GACCAGGACT ACGGCGCCAA ACAGAGCATT TTCGTGCCGC TGTTCGGCAT CCCCGCAGCC
ACGGTAACCG CCACCACCAA GTTCGCCCGG CTGGGCAAGG CGCAGGTTAT TCCGTTCACC
CAGAAGCGCC TGGAGGATGG CAGCGGCTAT CGTCTGGTAA TCCACCCGCC ACTGGCGGAT
TTCCCAGGCG AAAGCGAAGA GGCCGACTGC CTGCGTATCA ACCAGTGGGT CGAGGGTGTG
TTGCGCGAGT GTCCGGAGCA GTACCTGTGG GCGCACCGCC GGTTCAAGTC ACGGCCCGAG
GGTGCACCAC GGCTGTATGA GAAGAAAAAG CGCTGA
 
Protein sequence
MERPRFRPYY LHPKFWGLWL GLGLLWLVVQ LPYRVLLKIG AALGAVMYRF AGERRRIAAR 
NLELCFPELS VDERQRLLKA NFASTGIAFF EMAMSWWWPK ARLARLAHIE GLEHLQAAQQ
AGQGAILMAV HFTTLEIGAA LLGQQHTIDG MYREHGNALF DFIQRSGRER HNLDSLAVER
EDVRGMLKLL RSGRAIWYAP DQDYGAKQSI FVPLFGIPAA TVTATTKFAR LGKAQVIPFT
QKRLEDGSGY RLVIHPPLAD FPGESEEADC LRINQWVEGV LRECPEQYLW AHRRFKSRPE
GAPRLYEKKK R