| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1317 |
|---|
| Symbol | |
|---|
| ID | 5869081 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | - |
|---|
| Start bp | 1471421 |
|---|
| End bp | 1472227 |
|---|
| Gene Length | 807 bp |
|---|
| Protein Length | 268 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641546420 |
|---|
| Product | type I phosphodiesterase/nucleotide pyrophosphatase |
|---|
| Protein accession | YP_001667560 |
|---|
| Protein GI | 167032329 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1524] Uncharacterized proteins of the AP superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 0.807022 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCACA ACGTCATCCT GGTCCTGCTG GACGGCCTCA ACTACCAGGT CGCTCACCAC
GCCATGGGCC ACCTGCACGC TTACGTCGAG GCCGACCGCG CCGCGCTATA CCGGGTGGAA
TGCGAGCTGC CGTCGCTGTC GCGGCCGCTG TACGAATGCA TCCTCACCGG CGTGCCGCCG
ATCGACAGCG GCATCGTGCA CAACAACATC AACCGCCTGT CCAACCAGCG CAGCGTGTTC
CACTACGCCC GCGAGGCCAA CCTGGGCACC GCAGCCGCGG CCTATCACTG GATGAGCGAA
CTGTACAACC GCTCGCCCTT CGACCCGCAG CGCGACCGCC ACACCCATGC GCCCAAGCTG
CCGATCCAGC ACGGGCTGTT CTACTGGGAC GACCGTTACC CCGACTCGCA CCTGCTGGCC
GACGGCGAGT ACCTGCGCCG CCGTCACGCC CCCAACTTCC TGCTGGTGCA CCCGATGAGC
GTTGACGACA TCGGCCACCG TCACGGCCTG GACAGCAGCC AGTACCGCAA CGCTGCGCGC
AGCGTGGATA TTTTGCTGGC CGACTACCTG CCGGGTTGGC TCGAAGAGGG CTATCAGGTA
TTGGTTACCG CCGACCATGG CATGAACAAC GACCGCTCGC ACAACGGCCT GCTGGCCGAG
GAGCGCGAAG TGCCGCTGTT CGTGTTTGGC GACGCCTTCA GCCTGGACCC GGCCGCCAAA
CCGCTGCAGA CCGAGCTGTG CGGCACCATC TGCGAGCTGC TGGGCGCCGC GCACGACAAA
ACGGTTTGCC GGGAGTTGCT GAAGTGA
|
|---|
| Protein sequence | MSHNVILVLL DGLNYQVAHH AMGHLHAYVE ADRAALYRVE CELPSLSRPL YECILTGVPP
IDSGIVHNNI NRLSNQRSVF HYAREANLGT AAAAYHWMSE LYNRSPFDPQ RDRHTHAPKL
PIQHGLFYWD DRYPDSHLLA DGEYLRRRHA PNFLLVHPMS VDDIGHRHGL DSSQYRNAAR
SVDILLADYL PGWLEEGYQV LVTADHGMNN DRSHNGLLAE EREVPLFVFG DAFSLDPAAK
PLQTELCGTI CELLGAAHDK TVCRELLK
|
|---|
| |