| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1316 |
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| Symbol | |
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| ID | 5869080 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 1470585 |
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| End bp | 1471424 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641546419 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001667559 |
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| Protein GI | 167032328 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4132] ABC-type uncharacterized transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.151908 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.975763 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAATGGCG GCGCCCGTGG CCGCTACCTG GCCCTGCTCT GCCTGCTGCC GTTCGCCGTG
TTCTTCGTCA TCTTCCAGGT CGCCCCGCTG GCCTGGGTGG CGACCAACAG CCTGCAATCG
GACGCCGGCT GGGGCATCGA CAACTTCAGC AAGGTATTCG CCTCGAAGTT TTACCTGCAG
GCATTGCAAC GCAGCCTGGA AATCAGCTTC TGGTCGAGCC TGTTCGGCAT CGTCATCGCC
ACCCTCGGCG CCTATTCACT GCGCCGGGTG GACTCGAAGC TGCGCGACTT CGTCAGTGCC
TTCGCCAACA TGACCAGCAA CTTTGCCGGG GTGCCGCTGG CCTTCGCCTT CATCATCCTG
CTGGGTTTCA ACGGCGCACT GACCCTGCTG CTGAAGCAGG TCGGCCTGCT GGAAGACTTC
AGCATCTATT CCAAGAGCGG GCTGATCCTG GTGTACACCT ACTTCCAGAT CCCGCTGGGC
GTATTGCTGC TGTACCCCGC CTTCGACGCG CTGCGTGAAG ACTGGCGCGA GTCGGCCGCA
CTGCTGGGCG CCAACCACTG GCAGTACTGG CGGCACATCG GCCTGCCGGT GCTGACCCCG
GCACTGCTGG GCACGTTCGT CATCCTGCTG GCCAACGCCC TCGGTGCCTA CGCCACCGTG
TACGCACTGA CCACGGGTAA TTTCAACGTA CTGCCGATCC GTATCGCCGG CCTGGTGGCC
GGCGACATCA GCCTCGACCC GAACCTGGCC AGCGCCCTGG CCATGGTGCT GGTGGGGCTG
ATGACGCTGG TCACGGTGGT GCATCAATGG CTGCTGAAGA GGAGCTACCA TGCGCGCTGA
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| Protein sequence | MNGGARGRYL ALLCLLPFAV FFVIFQVAPL AWVATNSLQS DAGWGIDNFS KVFASKFYLQ
ALQRSLEISF WSSLFGIVIA TLGAYSLRRV DSKLRDFVSA FANMTSNFAG VPLAFAFIIL
LGFNGALTLL LKQVGLLEDF SIYSKSGLIL VYTYFQIPLG VLLLYPAFDA LREDWRESAA
LLGANHWQYW RHIGLPVLTP ALLGTFVILL ANALGAYATV YALTTGNFNV LPIRIAGLVA
GDISLDPNLA SALAMVLVGL MTLVTVVHQW LLKRSYHAR
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