| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1311 |
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| Symbol | |
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| ID | 5869075 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 1464854 |
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| End bp | 1466935 |
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| Gene Length | 2082 bp |
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| Protein Length | 693 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641546414 |
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| Product | carboxyl-terminal protease |
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| Protein accession | YP_001667554 |
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| Protein GI | 167032323 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0793] Periplasmic protease |
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| TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.299557 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCATT TCCTCCCAAG CACCGCCCTC GCTGTCATGA TCGGCCTGGG CAGCCTCACG
CTCGGCGGCA ATGCGGCGGC CGCCAACAAG TGGGACAGCC TGCAACCGGA CCGCGACGAG
ATCGTCGCCA GCCTCAACGT GGTGGAATTG CTCAAGCGCC ACCACTACAG CAAGCCCCCC
CTGGACGATG CCCGCTCGGT CATCATCTAC GACAGCTACA TCAAGCTGCT GGACCCGGCG
CGCAGCTACT TCACCGCTGC CGACATCGCC GAGTTCGACA AGTGGAAAAC GCAATTCGAC
GATTTCCTCA AGAGCGGTAA CCTGGACCCA GGCTTCACCA TCTACAAACG CTACCTCGAC
CGCGTCAAGC AACGCCTGGA CTTCGCCCTG GCCGAGCTGA ACAAAGGCGT GGACAAGATC
GACTTCACCA CCAAGGAAAC CTTGCTGATC GACCGCAAGG ACGCACCGTG GATGAAGGAC
CAGGCCGAGC TCGACGACCT GTGGCACAAG CGCGTGAAAG ACGAAGTGCT GCGCCAGAAA
ATCGCCGGCA AGGAACCCAA GCAGATCCAG GAAACCCTGA CCAAGCGCTA CAAGAACCAG
CTGGCGCGCC TGGACCAGAC CCGTGCCGAG GATATCTTCC AGGCCTACAT CAACACCTTC
GCCCAGTCCT ACGACCCGCA CACCAACTAC CTGTCGCCGG ACAACGCCGA AAACTTCGAC
ATCAACATGA GCCTGTCGCT CGAAGGCATC GGCGCGGTGC TGCAAAGCGA CAACGACCAG
GTCAAGATTG TGCGCCTGGT GCCGGCAGGC CCGGCCGCCA AGACCAAGCA AGTGGCCCCG
GCCGACAAGA TCATCGGCGT GGCCCAGGGC AACAAGGAAA TGGTCGACGT GGTCGGCTGG
CGCCTGGACG AAGTGGTCAA GCTGATCCGC GGCCCGAAAG GTTCGGTGGT GCGCCTGGAA
ATCATCCCGG CCAGCAACGC ACCTAGCGAC CAGACCAGCA AGATCGTGTC GATCACCCGT
GAAGCGGTGA AGCTTGAAGA GCAGGCAGCG AAAAAGTCGG TACTCAAGCT CAAGCAGGAC
GGGCGTGACT ACAAGCTGGG CATCATCGAG ATCCCGGCCT TCTACCTGGA CTTCAAGGCC
TACCGTGCAG GTGACCCGGA GTACAAGAGC ACCACGCGTG ACGTGAAAAA ACTGCTCACC
GAACTGCAGA AGGAAAAAGT CGACGGCGTG GTCATCGACC TGCGCAACAA CGGCGGCGGC
TCGTTGCAGG AAGCCACTGA GCTGACCAGC CTGTTCATCG AGAAAGGCCC AACCGTGCTG
GTGCGCAACA GCGATGGCCG CGTCGACGTG CTGGAAGACG AAAACCCAGG TGCCTTCTAC
AAAGGCCCGC TGGCGCTGCT GGTGAACCGG CTGTCGGCCT CGGCTTCGGA GATCTTCGCC
GGCGCCATGC AGGACTACCA CCGCGCACTG ATCATCGGTG GCCAGACCTT CGGCAAAGGC
ACCGTGCAGA CCATCCAGCC ACTCAACCAT GGCGAACTGA AGCTGACCCT GGCCAAGTTC
TACCGGGTTT CTGGGCAAAG CACCCAGCAC CAAGGCGTGC TGCCGGACAT CGACTACCCG
TCGATCATCG ACACCAAGGA AATCGGCGAG AGCGCGCTGC CCGAAGCCAT GCCGTGGGAC
ACCATTCGCC CGGCGATCAG GCCGGCGTCC GACCCGTTCA AGCCGTTCCT GGCCCAGCTC
AAGGCGCAGC ATGAAGCACG CAGTGACAAG GATGCCGAGT TCACCTACAT CCGCGACCGG
CTGGCCCTGA CCCAGAAGCT GATGAATGAA AAAACCGTCA GCCTCAACGA ACAGGAACGC
CGTGCACGCC ATGATGAAAT CGAGGCCAAG CAACTGGCGC TGGAAAACGT CCGCCGCAAG
GCCAAGGGTG AAGAGCCGCT GAAAGAGCTG AAGAAAGAGG ATGAAGACGC GCTGCCGGCC
GAAGATGAAA ACACCAAGCC GGAAGACGAC GCCTACCTGT CGGAAACCGG TCGCATCCTG
ATCGACTACC TCAGCGCCAG CACCAAGGTG GCCAAGAAGT AA
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| Protein sequence | MKHFLPSTAL AVMIGLGSLT LGGNAAAANK WDSLQPDRDE IVASLNVVEL LKRHHYSKPP
LDDARSVIIY DSYIKLLDPA RSYFTAADIA EFDKWKTQFD DFLKSGNLDP GFTIYKRYLD
RVKQRLDFAL AELNKGVDKI DFTTKETLLI DRKDAPWMKD QAELDDLWHK RVKDEVLRQK
IAGKEPKQIQ ETLTKRYKNQ LARLDQTRAE DIFQAYINTF AQSYDPHTNY LSPDNAENFD
INMSLSLEGI GAVLQSDNDQ VKIVRLVPAG PAAKTKQVAP ADKIIGVAQG NKEMVDVVGW
RLDEVVKLIR GPKGSVVRLE IIPASNAPSD QTSKIVSITR EAVKLEEQAA KKSVLKLKQD
GRDYKLGIIE IPAFYLDFKA YRAGDPEYKS TTRDVKKLLT ELQKEKVDGV VIDLRNNGGG
SLQEATELTS LFIEKGPTVL VRNSDGRVDV LEDENPGAFY KGPLALLVNR LSASASEIFA
GAMQDYHRAL IIGGQTFGKG TVQTIQPLNH GELKLTLAKF YRVSGQSTQH QGVLPDIDYP
SIIDTKEIGE SALPEAMPWD TIRPAIRPAS DPFKPFLAQL KAQHEARSDK DAEFTYIRDR
LALTQKLMNE KTVSLNEQER RARHDEIEAK QLALENVRRK AKGEEPLKEL KKEDEDALPA
EDENTKPEDD AYLSETGRIL IDYLSASTKV AKK
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