Gene PputGB1_1307 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_1307 
Symbol 
ID5869071 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp1462524 
End bp1462964 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content67% 
IMG OID641546410 
Producthypothetical protein 
Protein accessionYP_001667550 
Protein GI167032319 
COG category[S] Function unknown 
COG ID[COG3339] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000000000504633 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.282911 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCAC CCTGGAATTT CGCCCGCTTT CTGCCATTGG CCGAGCGCCT GCTCAGCCGC 
GGCCGCTTGC CGGCCTTGCT GTTCGCGGTG GCGCGCAAAG GCCCGCGCCT CGGCCAGCTG
CGTGAAGATG TGAAGCTGTT ACAGTCGCTG TGCCTGGCCT GGTGGCGCGG CGAGTACCGC
GCCATCAGCC CTGGGGCGCT GGTCACCATC GTGGCTGGCC TGCTGTATTT CGTCAGCCCC
ATCGATGCCA TCCCCGACTG GCTGCTGGGG GTGGGTTTTC TTGATGACAT CGCGGTGCTG
GGCTGGGTGC TGAAAACCGT GTCCGACGAG CTGGCGCGCT TCAAAGCCTG GCGCGATAGC
CAGGCGCCCG AACGGCTGCG CGTGGTCGAG CGCCTGCCAG CCACCCCGCA GGCGCTGCGG
CTGGAACGCA ATACGCACTA A
 
Protein sequence
MSAPWNFARF LPLAERLLSR GRLPALLFAV ARKGPRLGQL REDVKLLQSL CLAWWRGEYR 
AISPGALVTI VAGLLYFVSP IDAIPDWLLG VGFLDDIAVL GWVLKTVSDE LARFKAWRDS
QAPERLRVVE RLPATPQALR LERNTH