Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_1307 |
Symbol | |
ID | 5869071 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 1462524 |
End bp | 1462964 |
Gene Length | 441 bp |
Protein Length | 146 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641546410 |
Product | hypothetical protein |
Protein accession | YP_001667550 |
Protein GI | 167032319 |
COG category | [S] Function unknown |
COG ID | [COG3339] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000000000000504633 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.282911 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCAC CCTGGAATTT CGCCCGCTTT CTGCCATTGG CCGAGCGCCT GCTCAGCCGC GGCCGCTTGC CGGCCTTGCT GTTCGCGGTG GCGCGCAAAG GCCCGCGCCT CGGCCAGCTG CGTGAAGATG TGAAGCTGTT ACAGTCGCTG TGCCTGGCCT GGTGGCGCGG CGAGTACCGC GCCATCAGCC CTGGGGCGCT GGTCACCATC GTGGCTGGCC TGCTGTATTT CGTCAGCCCC ATCGATGCCA TCCCCGACTG GCTGCTGGGG GTGGGTTTTC TTGATGACAT CGCGGTGCTG GGCTGGGTGC TGAAAACCGT GTCCGACGAG CTGGCGCGCT TCAAAGCCTG GCGCGATAGC CAGGCGCCCG AACGGCTGCG CGTGGTCGAG CGCCTGCCAG CCACCCCGCA GGCGCTGCGG CTGGAACGCA ATACGCACTA A
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Protein sequence | MSAPWNFARF LPLAERLLSR GRLPALLFAV ARKGPRLGQL REDVKLLQSL CLAWWRGEYR AISPGALVTI VAGLLYFVSP IDAIPDWLLG VGFLDDIAVL GWVLKTVSDE LARFKAWRDS QAPERLRVVE RLPATPQALR LERNTH
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