| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1300 |
|---|
| Symbol | rdgC |
|---|
| ID | 5869060 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | - |
|---|
| Start bp | 1450268 |
|---|
| End bp | 1451188 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641546399 |
|---|
| Product | recombination associated protein |
|---|
| Protein accession | YP_001667543 |
|---|
| Protein GI | 167032312 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2974] DNA recombination-dependent growth factor C |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGGTTCA AGAACCTGCT GACCTACCGC CTGACCCAGG AAGTTCCGTT CGAGCCTGAA
GCGTTGGAAG CCGCCCTGGC CAGCAAGCCG GCCCGCCCAT GCGCCAGCCA GGAGCTGACC
ACCTACGGTT TCGTCGCGCC GTTCGGCAAA GGCGAAGACG CTCCCCTGGT GCATGTCAGC
GGCGAGTACC TGCTGATTGC CGCACGCAAG GAAGAACGCA TCCTGCCTAG CAGCGTGGTC
AACGACGCGG TCAAGGAAAA GGTCGAAGAG ATCGAGACCG AGCAAATGCG CAAGGTCTAT
AAAAAGGAAC GCGACCAGAT CAAGGACGAG ATCATCCAGG CCTTCCTGCC GCGCGCGTTC
ATCCGCCGCT CGATGATCTT CGCCGCCATC GCCCCGCGCC TGGGCGTGAT TCTGGTCAAC
TCGGCCAGCG CCAAGCGTGC CGAAGACCTG TTGTCGACCC TGCGTGAAGT GATGGGCTCG
CTGCCGGTGC GCCCTGCCAC GGTAAAAGTT GCACCGGTTG CCACCATGAC CGACTGGGTC
AAGTCGCAGC AAGCCGCCGA AGGCTTCCAT GTGCTGGACG AATGCGAGCT GCGCGACACG
GCCGAAGACG GCGGTATCGT GCGCTGCAAG CGCCAGGACC TGACGGGCGA GGAAATCCAG
CTGCACCTGA GCACTGGCAA GGTAGTGACC CAGCTGGCCC TGGCCTGGCA GGACAAGCTG
TCGTTCATTC TCGACGACAA GATGGTCATC AAGCGCCTGA AGTTCGAAGA GCTGCTGCAA
GAGCAAGCCG AGCAGGACGG TGGCGATGAA GCTGCGCAGC AGTTCGATGC CAGCTTCCAG
CTGATGATGA TGACCTTTGC CGAGTTCCTG CCGGTGCTGT TCGAGGCACT GGGTGGAGAA
GAGATTCCGC AAGGGGTCTG A
|
|---|
| Protein sequence | MWFKNLLTYR LTQEVPFEPE ALEAALASKP ARPCASQELT TYGFVAPFGK GEDAPLVHVS
GEYLLIAARK EERILPSSVV NDAVKEKVEE IETEQMRKVY KKERDQIKDE IIQAFLPRAF
IRRSMIFAAI APRLGVILVN SASAKRAEDL LSTLREVMGS LPVRPATVKV APVATMTDWV
KSQQAAEGFH VLDECELRDT AEDGGIVRCK RQDLTGEEIQ LHLSTGKVVT QLALAWQDKL
SFILDDKMVI KRLKFEELLQ EQAEQDGGDE AAQQFDASFQ LMMMTFAEFL PVLFEALGGE
EIPQGV
|
|---|
| |