Gene PputGB1_1296 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_1296 
Symbol 
ID5869056 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp1445914 
End bp1446747 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content65% 
IMG OID641546395 
Productamidohydrolase 2 
Protein accessionYP_001667539 
Protein GI167032308 
COG category[R] General function prediction only 
COG ID[COG3618] Predicted metal-dependent hydrolase of the TIM-barrel fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.579716 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGACG CTCCTGCTTT ACACCTGACT GCCATCGACA GCCACGCCCA CGTATTCAGC 
CGTGGGTTGA ACCTGGCCAG CGTGCGGCGT TACGCGCCCA GCTACGATGC GCCGCTGGGC
GACTACCTGG GCCAGTTGCT GGCCCATGGT TTCAGCCATG GCGTGCTGGT TCAGCCCAGC
TTCCTCGGTA CCGACAATCG TTACCTGCTC AGTGCCTTGC AGACCGTGCC GGGGCAATTG
CGCGGGGTGG TGATGCTGGA GCGAAATGTC GAACGGGCGA GCCTGGACGA AATGGCAAGG
TTGGGCGTGA GGGGTGTGCG CTTGAACCTC ATGGGGCAGG CCTTGCCTGA CCTGACCGGC
GCCGAATGGC GGCCTATGTT GGAGCGCATT GGCGAGCAGG GCTGGCACCT GGAGCTGCAT
CGGCAAGTGG CCGACATACC GGCGTTGGTG CGGGCCCTCG AACCCTATGG GCTGGACATC
GTGATCGACC ATTTTGGCCG GCCCGATGCC CGCCGTGGCC TCGGCCAGCC GGGGTTCGCC
GAGCTGCTGA CCCTGGGCGG ACGGGGCAAG GTCTGGGTGA AGGTGTCTGG CATCTATCGG
CTGGAAGGTT CGCCCGAGGA GAACCTTTCA TTCGCCCGTC AGACGCTATG CGCGCTGGAA
GCCCATTACG GGGCGCAGCG GTTGATGTGG GGCAGTGACT GGCCGCATAC CCAGCATGAA
TCGGCAGTGA GTTTCGGCAC CGCTGTCGAG CAGTTCGACG CCCTGGGCTG TTCGGCGCAG
TTGCGCCGGG CCTTGTTGTT GGATACCGCG CAGGCGTTGT TCGGTTTCGA GTGA
 
Protein sequence
MPDAPALHLT AIDSHAHVFS RGLNLASVRR YAPSYDAPLG DYLGQLLAHG FSHGVLVQPS 
FLGTDNRYLL SALQTVPGQL RGVVMLERNV ERASLDEMAR LGVRGVRLNL MGQALPDLTG
AEWRPMLERI GEQGWHLELH RQVADIPALV RALEPYGLDI VIDHFGRPDA RRGLGQPGFA
ELLTLGGRGK VWVKVSGIYR LEGSPEENLS FARQTLCALE AHYGAQRLMW GSDWPHTQHE
SAVSFGTAVE QFDALGCSAQ LRRALLLDTA QALFGFE