Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_1296 |
Symbol | |
ID | 5869056 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 1445914 |
End bp | 1446747 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641546395 |
Product | amidohydrolase 2 |
Protein accession | YP_001667539 |
Protein GI | 167032308 |
COG category | [R] General function prediction only |
COG ID | [COG3618] Predicted metal-dependent hydrolase of the TIM-barrel fold |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.579716 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGACG CTCCTGCTTT ACACCTGACT GCCATCGACA GCCACGCCCA CGTATTCAGC CGTGGGTTGA ACCTGGCCAG CGTGCGGCGT TACGCGCCCA GCTACGATGC GCCGCTGGGC GACTACCTGG GCCAGTTGCT GGCCCATGGT TTCAGCCATG GCGTGCTGGT TCAGCCCAGC TTCCTCGGTA CCGACAATCG TTACCTGCTC AGTGCCTTGC AGACCGTGCC GGGGCAATTG CGCGGGGTGG TGATGCTGGA GCGAAATGTC GAACGGGCGA GCCTGGACGA AATGGCAAGG TTGGGCGTGA GGGGTGTGCG CTTGAACCTC ATGGGGCAGG CCTTGCCTGA CCTGACCGGC GCCGAATGGC GGCCTATGTT GGAGCGCATT GGCGAGCAGG GCTGGCACCT GGAGCTGCAT CGGCAAGTGG CCGACATACC GGCGTTGGTG CGGGCCCTCG AACCCTATGG GCTGGACATC GTGATCGACC ATTTTGGCCG GCCCGATGCC CGCCGTGGCC TCGGCCAGCC GGGGTTCGCC GAGCTGCTGA CCCTGGGCGG ACGGGGCAAG GTCTGGGTGA AGGTGTCTGG CATCTATCGG CTGGAAGGTT CGCCCGAGGA GAACCTTTCA TTCGCCCGTC AGACGCTATG CGCGCTGGAA GCCCATTACG GGGCGCAGCG GTTGATGTGG GGCAGTGACT GGCCGCATAC CCAGCATGAA TCGGCAGTGA GTTTCGGCAC CGCTGTCGAG CAGTTCGACG CCCTGGGCTG TTCGGCGCAG TTGCGCCGGG CCTTGTTGTT GGATACCGCG CAGGCGTTGT TCGGTTTCGA GTGA
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Protein sequence | MPDAPALHLT AIDSHAHVFS RGLNLASVRR YAPSYDAPLG DYLGQLLAHG FSHGVLVQPS FLGTDNRYLL SALQTVPGQL RGVVMLERNV ERASLDEMAR LGVRGVRLNL MGQALPDLTG AEWRPMLERI GEQGWHLELH RQVADIPALV RALEPYGLDI VIDHFGRPDA RRGLGQPGFA ELLTLGGRGK VWVKVSGIYR LEGSPEENLS FARQTLCALE AHYGAQRLMW GSDWPHTQHE SAVSFGTAVE QFDALGCSAQ LRRALLLDTA QALFGFE
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