| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1286 |
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| Symbol | |
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| ID | 5869046 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 1432592 |
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| End bp | 1433521 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641546385 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001667529 |
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| Protein GI | 167032298 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.451679 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.620266 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCTGC TCAACGCCAT CCGCTGTTTC ATCAAGGTGG TCGAGGCTGG CAGCATCGCC
GCTGGTGCGC GTAATCTCGG CCTTAGCCCG GCAGCCGTCA GCCAGAACCT GGCGCGACTC
GAAGGCCACC TGCGGGTACG CCTGCTCAGC CGCACCACAC GCAGCATGGC CTTGACGCCT
GCAGGCACCC AGTATTACGA GCGCGTGAAG CACATCGACC GTGACCTGGC CTTGGCCGAA
CAGGCGGTTA CAACCCCAGA CAGCGAGCCC CAGGGGCGGC TGTGCATCGC CTCGACGTCC
GCCTTTGGCC GACACGTGCT GGCGCCGCTG ATACCCGCAT TCAGTGCCCG ATATCCCCTA
CTTTCGATAG AGTTGATAAC GACTGATCGC CGGGTAAACC ATGCCCGTGA AGACATCGAC
GTAAGCCTGC GCATTGCCCC GCAACTGGAA GACCAACTGC TGGCCCGGCA CATTGCCCGC
ATCCCGTTCA TTTGCTGTGC CTCACCCGGA TACCTGCACA GCGCAGGTGT ACCCGCTACG
CCCGAGTCAT TGCTCACTCA CCGGTGTCTG GTGTTTCGCT ACCCGGTGGA TGGGCGGTTT
CTGCGCTGGG GCTTCGTGCG CGACGGGCTG CGTTTTGACG CGGAGTTCGG CAGCGTATTG
ATCAGTGACG ATATCGATGC CCTGACCCAA ATGGCACTGC ATGATGGTGG CATCGCCCGC
CTGGCCGAGT TCATTGTCCG GCCTCATCTT GCCTCCGGTG CGCTCGTACC GCTTTTCGAA
TTCAGCGACA GCGGCCAGGC CTATGCCCAG ACCGAGCCGA TGGATATCTA CCTGTGCCTG
GCCGACCGCT TTGCCATGAC CACCAAAGTG CGGGTGTTCA TGGACTACCT GCGCGACTGT
CTGGGGGCTC GCTGGCAGGT GCAGGCATGA
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| Protein sequence | MDLLNAIRCF IKVVEAGSIA AGARNLGLSP AAVSQNLARL EGHLRVRLLS RTTRSMALTP
AGTQYYERVK HIDRDLALAE QAVTTPDSEP QGRLCIASTS AFGRHVLAPL IPAFSARYPL
LSIELITTDR RVNHAREDID VSLRIAPQLE DQLLARHIAR IPFICCASPG YLHSAGVPAT
PESLLTHRCL VFRYPVDGRF LRWGFVRDGL RFDAEFGSVL ISDDIDALTQ MALHDGGIAR
LAEFIVRPHL ASGALVPLFE FSDSGQAYAQ TEPMDIYLCL ADRFAMTTKV RVFMDYLRDC
LGARWQVQA
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