| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1278 |
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| Symbol | cobT |
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| ID | 5869038 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 1427188 |
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| End bp | 1428243 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641546377 |
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| Product | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase |
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| Protein accession | YP_001667521 |
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| Protein GI | 167032290 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2038] NaMN:DMB phosphoribosyltransferase |
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| TIGRFAM ID | [TIGR03160] nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.894817 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCAAG CCTGGTGGCG TGACGCCTGC CATCCCCTCG ACAACGATGC CATGGACCAG
GCCCACGCCC GTCAGCAGCA ACTGACCAAA CCTGCCGGCT CACTCGGCCA GCTGGAGGGC
TTGGCTATCC AGTTGGCAGG CCTGCAAGGG TGTGAGCGGC CGATCCTGGA TCAGGTCGCA
ATTACCATTT TTGCCGGCGA CCACGGGGTG GTCGAAGAAG GCATCTCGGC CTACCCGCAG
GCGGTGACCG GGCAGATGCT GCGTAACTTC GTCGGCGGCG GTGCGGCGAT CAGTGTACTG
GCGCGGCAAC TGCAAGCCAG CCTGGAAGTG GTCGACCTGG GCACCATCGA CGCGCAGTTG
GAGCTGCCCG GTGTGCGCCA TCTGCGCCTG GGCGCCGGCA CCGCCAACTT TGCCTGCCAG
CCCGCGATGA CCGAGAACCA GTTGCAAGCA GCCTTGCAGG CCGGCCGCGA CAGCGCCCTG
CGCGCCGCTG AACAGGGTGC TCAGCTGTTC ATCGGTGGCG AGATGGGCAT CGGCAACACC
ACGGCCGCCG CAGCCCTGGC CAGCGTCCTG CTGAGCTGCC CGGCGGCACA GCTGAGCGGC
CCAGGCACTG GGCTGGACAA TGCCGGCGTG CGGCACAAGG CCGAGGTCAT CGAGCGGGCG
CTGCGCCTGC ACGGCCTGCG TGCTGAAAAC CCGTTGCAGG CGCTGGGCTG TGTTGGCGGA
TTCGAGATAG CGGCGTTGGC TGGCGCCTAC ATCGGCTGCG CGCAGGCGGG TGTTGCGGTG
CTGGTGGATG GTTTCATCTG CAGTGTCGCC GCGTTGGTGG CAGTGCATCT TAACCCGCAG
TGCCGGGCCT GGCTGCTGTT CGCCCACCAG GGTGCCGAGC CTGGGCACAA GGCCTTGCTG
GCTGCGCTGC AGGCCGAGCC GTTGCTGGCC CTGGGCCTGC GCCTGGGCGA GGGCAGTGGT
GCTGCCCTGG CGGTGCCGCT GCTGCGCCTG GCCTGTGCGC TGCATGGGCA AATGGCGACC
TTTGCCGAGG CCGCGGTGGC GGACCGCCCG GCATGA
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| Protein sequence | MTQAWWRDAC HPLDNDAMDQ AHARQQQLTK PAGSLGQLEG LAIQLAGLQG CERPILDQVA
ITIFAGDHGV VEEGISAYPQ AVTGQMLRNF VGGGAAISVL ARQLQASLEV VDLGTIDAQL
ELPGVRHLRL GAGTANFACQ PAMTENQLQA ALQAGRDSAL RAAEQGAQLF IGGEMGIGNT
TAAAALASVL LSCPAAQLSG PGTGLDNAGV RHKAEVIERA LRLHGLRAEN PLQALGCVGG
FEIAALAGAY IGCAQAGVAV LVDGFICSVA ALVAVHLNPQ CRAWLLFAHQ GAEPGHKALL
AALQAEPLLA LGLRLGEGSG AALAVPLLRL ACALHGQMAT FAEAAVADRP A
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