Gene PputGB1_1263 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_1263 
Symbol 
ID5869023 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp1410301 
End bp1411359 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content64% 
IMG OID641546362 
Productphosphoribosylaminoimidazole synthetase 
Protein accessionYP_001667506 
Protein GI167032275 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0150] Phosphoribosylaminoimidazole (AIR) synthetase 
TIGRFAM ID[TIGR00878] phosphoribosylaminoimidazole synthetase 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.045095 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAGC AACCCTCCCT GAGCTACAAG GACGCCGGTG TAGACATCGA CGCCGGCGAA 
GCACTGGTCG AACGCATCAA GGGCGTGGCA AAACGCACCG CACGCCCTGA AGTCATGGGT
GGCCTGGGTG GCTTCGGCGC CCTTTGCGAG ATCCCGGCTG GCTACAAGCA GCCGGTGCTG
GTCTCCGGCA CCGACGGCGT CGGCACCAAG CTGCGCCTGG CATTGAACCT GAACAAGCAC
GACAGCATTG GCCAGGACCT GGTCGCCATG TGCGTCAACG ACCTGGTGGT ATGCGGCGCC
GAGCCGCTGT TCTTCCTGGA CTACTACGCC ACTGGCAAGC TGAACGTTGA CGTGGCTGCC
ACCGTGGTCA CCGGCATTGG CGCCGGTTGC GAACTGGCCG GCTGCTCGCT GGTCGGTGGT
GAAACCGCCG AAATGCCTGG CATGTACGAA GGCGAAGACT ACGACCTGGC CGGTTTCTGC
GTCGGCGTGG TGGAAAAGGC CGAAATCATC GATGGCTCCA AGGTTGCCAC TGGCGACGCA
CTGATCGCTC TGCCGTCCTC GGGCCCGCAC TCCAACGGCT ACTCGCTGAT CCGCAAGATC
CTCGAAGTGT CGGCTACCGA CATCGAAAAC ACCCAGCTGG ACGGCAAGCC GCTGACCGAC
CTGCTGATGG CGCCGACCCG CATCTACGTC AAGCCGCTGC TGCAACTGAT CAAGAACACT
GGCGCAGTCA AGGCCATGGC CCACATCACC GGTGGCGGCC TGTTGGACAA CATCCCGCGC
GTGCTGCCGA AAAACGCCCA GGCCGTGGTT GACGTGGCCA GCTGGCAGCG CCCTGCGGTA
TTCGACTTCC TGCAGGAAAA AGGCAACGTC GACGAGCACG AAATGCACCG TGTGCTGAAC
TGCGGCGTGG GCATGGTCAT CTGCGTCGCC CAGGACCAGG TCGAAGCGGC CCTGAACGAA
CTGCGCGCCG CCGGTGAACA GCCATGGGTG ATCGGCCACA TCGCCGAAGC CGCCGAAGGC
GCCGCCCAGG TCGAGCTGCA GAACCTCAAG GCACACTGA
 
Protein sequence
MSKQPSLSYK DAGVDIDAGE ALVERIKGVA KRTARPEVMG GLGGFGALCE IPAGYKQPVL 
VSGTDGVGTK LRLALNLNKH DSIGQDLVAM CVNDLVVCGA EPLFFLDYYA TGKLNVDVAA
TVVTGIGAGC ELAGCSLVGG ETAEMPGMYE GEDYDLAGFC VGVVEKAEII DGSKVATGDA
LIALPSSGPH SNGYSLIRKI LEVSATDIEN TQLDGKPLTD LLMAPTRIYV KPLLQLIKNT
GAVKAMAHIT GGGLLDNIPR VLPKNAQAVV DVASWQRPAV FDFLQEKGNV DEHEMHRVLN
CGVGMVICVA QDQVEAALNE LRAAGEQPWV IGHIAEAAEG AAQVELQNLK AH