Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_1263 |
Symbol | |
ID | 5869023 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 1410301 |
End bp | 1411359 |
Gene Length | 1059 bp |
Protein Length | 352 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641546362 |
Product | phosphoribosylaminoimidazole synthetase |
Protein accession | YP_001667506 |
Protein GI | 167032275 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0150] Phosphoribosylaminoimidazole (AIR) synthetase |
TIGRFAM ID | [TIGR00878] phosphoribosylaminoimidazole synthetase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.045095 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCAAGC AACCCTCCCT GAGCTACAAG GACGCCGGTG TAGACATCGA CGCCGGCGAA GCACTGGTCG AACGCATCAA GGGCGTGGCA AAACGCACCG CACGCCCTGA AGTCATGGGT GGCCTGGGTG GCTTCGGCGC CCTTTGCGAG ATCCCGGCTG GCTACAAGCA GCCGGTGCTG GTCTCCGGCA CCGACGGCGT CGGCACCAAG CTGCGCCTGG CATTGAACCT GAACAAGCAC GACAGCATTG GCCAGGACCT GGTCGCCATG TGCGTCAACG ACCTGGTGGT ATGCGGCGCC GAGCCGCTGT TCTTCCTGGA CTACTACGCC ACTGGCAAGC TGAACGTTGA CGTGGCTGCC ACCGTGGTCA CCGGCATTGG CGCCGGTTGC GAACTGGCCG GCTGCTCGCT GGTCGGTGGT GAAACCGCCG AAATGCCTGG CATGTACGAA GGCGAAGACT ACGACCTGGC CGGTTTCTGC GTCGGCGTGG TGGAAAAGGC CGAAATCATC GATGGCTCCA AGGTTGCCAC TGGCGACGCA CTGATCGCTC TGCCGTCCTC GGGCCCGCAC TCCAACGGCT ACTCGCTGAT CCGCAAGATC CTCGAAGTGT CGGCTACCGA CATCGAAAAC ACCCAGCTGG ACGGCAAGCC GCTGACCGAC CTGCTGATGG CGCCGACCCG CATCTACGTC AAGCCGCTGC TGCAACTGAT CAAGAACACT GGCGCAGTCA AGGCCATGGC CCACATCACC GGTGGCGGCC TGTTGGACAA CATCCCGCGC GTGCTGCCGA AAAACGCCCA GGCCGTGGTT GACGTGGCCA GCTGGCAGCG CCCTGCGGTA TTCGACTTCC TGCAGGAAAA AGGCAACGTC GACGAGCACG AAATGCACCG TGTGCTGAAC TGCGGCGTGG GCATGGTCAT CTGCGTCGCC CAGGACCAGG TCGAAGCGGC CCTGAACGAA CTGCGCGCCG CCGGTGAACA GCCATGGGTG ATCGGCCACA TCGCCGAAGC CGCCGAAGGC GCCGCCCAGG TCGAGCTGCA GAACCTCAAG GCACACTGA
|
Protein sequence | MSKQPSLSYK DAGVDIDAGE ALVERIKGVA KRTARPEVMG GLGGFGALCE IPAGYKQPVL VSGTDGVGTK LRLALNLNKH DSIGQDLVAM CVNDLVVCGA EPLFFLDYYA TGKLNVDVAA TVVTGIGAGC ELAGCSLVGG ETAEMPGMYE GEDYDLAGFC VGVVEKAEII DGSKVATGDA LIALPSSGPH SNGYSLIRKI LEVSATDIEN TQLDGKPLTD LLMAPTRIYV KPLLQLIKNT GAVKAMAHIT GGGLLDNIPR VLPKNAQAVV DVASWQRPAV FDFLQEKGNV DEHEMHRVLN CGVGMVICVA QDQVEAALNE LRAAGEQPWV IGHIAEAAEG AAQVELQNLK AH
|
| |