Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_1254 |
Symbol | |
ID | 5869014 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 1400902 |
End bp | 1402275 |
Gene Length | 1374 bp |
Protein Length | 457 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641546353 |
Product | integral membrane sensor signal transduction histidine kinase |
Protein accession | YP_001667497 |
Protein GI | 167032266 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.877162 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.000367617 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCTGGATC GCCACTCGCT GTTCTGGAAA CTCGCCATTT TGCTGGTGGG TTTCTGCCTG CTGATGATCG GCCTCAGTTA CACCTGGGGC CGGCACATGG AAACCCAGAA TGCCTTCCTA TCGGAGCCGG CCCGGCAGGC ATTGCGGGGC TACGCCGGCG AGGCTGAACA GGCCTGGCGC AGCGGTGGGC GGGCGGGGCT GGACCAGTGG GTGGCGGCGA TGCATCAGCG TGAACGGGGC TGGGTGGGCG TGCTCGACAT CAACCTGCGG CCGCTCGACA GCGCTACCCT CAACCCGCAG ATCATGCAGC GGCTGACCCG CCTGCGCGGT GTCGACTGGC CGATGAGCCG GCGCAGCGTC GACCAGCCGT GGGTGCGCAT ACCCTTCCCG GGGGCGCCGG AGCAGGGCAT GCTGGTGATC GAGCTGCCAC AGCGGTTCAA CCCGGACCAG TACCGCTTGC TGTGGCGCAT TGTCACCAAC GGCATCATCC CCGGTCTGTT CACCTTGTTG CTGTGCGTGG GCCTGTACCG GATGTTGATC GTGCCGCTGA ACCAGCTGCG CGAGCAGGCC AATGCCTGGC GCGCCGATCA GCTGTCGGCA CGCCTGGACT CGCGCACCAT CGCCCGGCAC GACGAGCTGG GCGAGCTGGC CCGTGCCTTC GACCAGATGG CCGAGCGGCT ACAGGGCACG GTGGCCATGC AGCAGCAGTT GCTGCGCGAC TTGTCCCACG AAATGCGCAC GCCGCTGAGC CGGTTGCGGG TCGCTTGCGA CGGCGAAACC GACCTGCAAC GCCTGCGTGA GCGCCTGACC CGTGAGGTGG ACTGCATGCA GCAGCTGGTG GAGGGCACCC TGCAGTTGGC CTGGCAGGAC GCCGAACGTG CGCCGATGAA CCTGGAACCG ATCGAAGTGC ACGCGCTTTG GGAGCTGCTG GCTGAGAATG CCTGCTATGA AAGCGGCTGG TCGCCTGCCC GCTTGCGCTG CGAAGTGCCG GCCGACTGCT GGGTGCAGGG CAACCTCAAC CACCTGGCCC AGGCGCTGGA GAACATGCTG CGCAATGCCA TCCGCCATTC ACCGGCCGAG GGTGTCGTGC GGTTGGGCGG GCAGCGTGAG GGTAGCTATT GGTGGTTGTG GCTGGAGGAT GAGGGCGGCG GGGTGGCCGA AGAAGACCTG GAGAGGATCT TCGCGCCGTT CTCGCGGCTG GATGGCTCGC GACCGGGGGA TGGTGGTTTT GGCCTGGGGC TGAGCATTGC CCGCAGCGCC ATCCAGCGCC AGGGTGGGAC CTTGTGGGCG CAGAATGGCA AGCATGGGTT GCGGCTGTGG ATGCGTTTGC CGTCACATGT ATCGGCCTCT TCGCGGGTAC CACATTTCAC CTGA
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Protein sequence | MLDRHSLFWK LAILLVGFCL LMIGLSYTWG RHMETQNAFL SEPARQALRG YAGEAEQAWR SGGRAGLDQW VAAMHQRERG WVGVLDINLR PLDSATLNPQ IMQRLTRLRG VDWPMSRRSV DQPWVRIPFP GAPEQGMLVI ELPQRFNPDQ YRLLWRIVTN GIIPGLFTLL LCVGLYRMLI VPLNQLREQA NAWRADQLSA RLDSRTIARH DELGELARAF DQMAERLQGT VAMQQQLLRD LSHEMRTPLS RLRVACDGET DLQRLRERLT REVDCMQQLV EGTLQLAWQD AERAPMNLEP IEVHALWELL AENACYESGW SPARLRCEVP ADCWVQGNLN HLAQALENML RNAIRHSPAE GVVRLGGQRE GSYWWLWLED EGGGVAEEDL ERIFAPFSRL DGSRPGDGGF GLGLSIARSA IQRQGGTLWA QNGKHGLRLW MRLPSHVSAS SRVPHFT
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