| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1253 |
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| Symbol | |
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| ID | 5869013 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 1400137 |
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| End bp | 1400898 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641546352 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_001667496 |
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| Protein GI | 167032265 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 0.85938 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.000294124 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTCAATA ATTGCACAAT TGAGAATGCA TGGCAGTTGC CAATGAATCC TGTAGCTATT
CACAACTCCA ATATCCTCGC CATCGAGGAC GACCCGGTCC TGGGTGCCTA TCTGCACGAA
GAGCTGCAAC GGGGTGGTTT TCAGGTCACC TGGTGCCGTA ATGGCCTGGA GGGTTTGGAA
ACAGCGGGTC GCCAAATCTT CGATGTGGTG CTCATGGACA TCCTGCTGCC GGGGCTCAAT
GGCCTGGATG CCCTGGCGCA ATTGCGCAAG CGTAGCGCCA CACCGGTGAT CCTGATGTCG
GCGCTGGGGG CCGAGGCCGA CCGTATCAGC GGCTTTCAGC GAGGGGCCGA CGATTACCTG
CCCAAGCCGT TCAGCATGGC CGAGTTGCAG GTGCGCATCG AGGCGATTCT GCGCCGCGTG
GCCCTTGAGC GGCGCTATCA AGCTCCATTG GAGCAGGCTG GCTGCGGTGA GCTGGAGTTC
GATGAGGGGC TATGCGATGT GCGCCTGGAT GGCCATCTGG CAGGCTTGAC CCCCAGCGAG
TTCCGGTTGT TGGACATCCT TAACCGCAAC CTCGAAGAGG TCCTGAGCAA ACCGTTTCTG
TACCAGCAGG TGTTGCAGCG CGGCTATTCG CGGCATGACC GCAGCCTGGA CATGCACGTC
AGCCAGATCC GTCGCAAGCT CAAGGGTATC GGCTACCACG AACGACAGAT ACGCACCGTG
TGGGGCAAGG GTTATGTGCT CAGCGCCAGC GAGGCGGAGT GA
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| Protein sequence | MLNNCTIENA WQLPMNPVAI HNSNILAIED DPVLGAYLHE ELQRGGFQVT WCRNGLEGLE
TAGRQIFDVV LMDILLPGLN GLDALAQLRK RSATPVILMS ALGAEADRIS GFQRGADDYL
PKPFSMAELQ VRIEAILRRV ALERRYQAPL EQAGCGELEF DEGLCDVRLD GHLAGLTPSE
FRLLDILNRN LEEVLSKPFL YQQVLQRGYS RHDRSLDMHV SQIRRKLKGI GYHERQIRTV
WGKGYVLSAS EAE
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