| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1252 |
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| Symbol | |
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| ID | 5869012 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 1397231 |
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| End bp | 1399984 |
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| Gene Length | 2754 bp |
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| Protein Length | 917 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641546351 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_001667495 |
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| Protein GI | 167032264 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.376653 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0000592891 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGCTCGATC GTTTGGGAAT TCGCAGCCGG GTACTGCTGC TGGCACTGCT GCCGGCCGGC
TTGATGGCCC TGGTGCTGGG CAGTTACTTC ACCTGGCTGC AACAGAACGA CCTGCGCACC
CAGTTGCTGC AGCGCGGCAA GATGATCGCC GAACAACTGG CGCCACTGGC AGCACCTGCC
ATGGCCCGGC TTGCGCCTGC GCAACTGGAA CGCATTGCCG CACAAACCCT GGAGCAGGCC
GATGTGCGCG CCGTCGCCTT CCTGGCCCCG GACCGCACGC GCCTGGCCCA CGCCGGCCCG
AGCATGCTCA ACCTGCCACC CAGCGGCGGG ACCGGCACGC AACTGCTGCA GCGCAGTGGC
AATGACGCCA CCCGCTACCT GATGCCGGTG TTCGGCCACC ACCGCGACCT GGCCACCGAT
GCCGTGCCGG CCGAAGCCGA GCGCCTGCTG GGCTGGGTAG AGATCGAGCT GTCGCACGAC
GGCACGCTGC TGCGCGGCTA CCGCAACCTG TTCACCAGCC TGTTGCTGAT CTTCGCCTGC
CTGGTCCTCA GCGGCCTGCT GGCGCTGCGC ATGAGCCGCA CCATCAACGA CCCCATCGAA
CGCATCAAGC ACGCGGTCAA CCAGCTCAAG GACGGCCACC TCGAAGAACG CCTGCCGGCC
ATGGGCAGCC ATGAGCTGGA CGAGCTGGCT CGCGGTATCA ACCGCATGGC CGAAACCCTG
CAAAACGCCC ACGAAGAACT GCAGCACAGC ATCGATCAGG CCACCGAGGA CGTGCGCCAG
AACCTGGAAA CCATCGAAAT CCAGAACATC GAGCTTGATA TGGCGCGCAA GGAAGCCCTT
GAAGCCAGCC GTATCAAGTC AGAATTCCTG GCCAACATGA GCCACGAGAT CCGTACCCCG
CTCAACGGCA TCCTCGGCTT CACCCACTTG CTGCAAAAAA GCGAGATGAC GCCGCGCCAG
CTGGACTACT TGAGCACCAT CGAGAAGTCC GCCGACAACC TGCTGGGGAT CATCAACGAG
ATCCTCGACT TCTCCAAGAT CGAGGCCGGC AAGCTGGTGC TCGACAGCAT TCCGTTCAAC
CTGCGCGACC TGATCCAGGA CACCCTGACC ATCCTTGCCC CGGCCGCCCA CGCCAAGCAG
TTGGAATTGC TCAGCCTGAT CTACCGCGAC ACGCCGTCCT CGCTGATCGG CGACCCGTTG
CGGCTCAAGC AGATCCTCAC CAACCTGGTC AGCAACGCCA TCAAGTTCAC CCGCGAAGGC
ACGATCGTGG TGCGCGCCAT GCTCGACGAC GAGCACGAAG ACCACGCGCA ACTGCGCATC
AGTGTGCAGG ACACCGGCAT CGGCCTGTCG CCGCAGGATG TGCGCACACT GTTCCAGGCC
TTCAGCCAGG CCGACAACTC GCTGGCCCGG CAGCCGGGTG GCACTGGCCT GGGGCTGGTG
ATTTCCAAGC GCCTGATCGA GCAGATGGGC GGCGAAATCG GTGTCGACAG CACTCCGGGT
GAAGGTTCGC AGTTCTGGAT CAGCCTCAAC CTGCCCAAGG CTCACGACGA TGTCGAGGAG
CTTCCGCTGC AGCCACTACT GGGCCGCCGC GCAGCCATTG TCGATGGCCA CGAACTGGCG
CGCCAGGCGC TGGAGCACCA GCTGGAAGAC TGCGGCCTCA GCGTGAGCCT GTTCGCCTCC
TACGACCAAT TGCTGCATGG GGTGCAGGCC GCCAGCCAAG CCGGCCTGCC GTTCGAGTTC
GCCGTGCTCG GGGCCAACCT GGGCAACCTG TCGCCCGAGC AACTGGGCCA CTATCACCAG
CAGCTTGAGC GTTACCATTG CCAATGCGTG GTGCTGTGCC CGACCACCGA GCAGGCGCTG
TACCACCCGT ACCTGCCCAA CGGCCATGGC CAGTTGCTGT CCAAGCCCAC CTGCACCCGC
AAGCTGCGGC GCCTATTGCT GGAGCTGGTG CAGCCGCGTC GACCGCTGGC CGAGGTGAAC
AACGTCAACG GCCAGCGCCA GCCGAAAATA CTCTGCGTCG ACGACAATGC CGCCAACCTG
CTGCTGGTGC AGACCCTGCT CGAAGACCTG GGTGCTGAGG TGCTGGCCGT CGACAATGGT
TATGCTGCGG TACAGGCCGT GCAGGATGAG CCGTTCGACC TGGTGCTGAT GGACGTGCAG
ATGCCTGGCA TGGACGGCCG CGCCTGCACC GAACAGATCC GCCTGTGGGA AAACACCCAA
AGCGGCAACC CGCTGCCGAT CGTCGCCCTC ACGGCCCATG CCATGGCCAA CGAAAAGCGC
GCGTTGCTGC ACGGCGGCAT GGATGACTAC CTGACCAAAC CGATCAGCGA ACGGCAACTG
GCCCAGGTGG TGATGAAATG GACCGGCCTG AGCCTCGGTG CACCGCACCA GGCGCAGGCC
GAGTTGCCGG CCAACGGCGA TGAACTGAAG GTGCTCGACC CGGAAGAGGG CCTGCGCCTG
GCCGCTGGCA AGGCAGACCT GGCGGCCGAC ATGCTGAGCA TGCTGCTGGC CTCGCTGGAT
GCCGACCGCG AAGCCATACG CGCTGCCCGC GAGGCCAATG ACCGCGAAGG GCTGATCGAG
CAGGTGCACC GTCTGAACGG CGCCTCGCGC TATTGCGGCG TGCCGCAGTT GCGGGCAGCG
TGCCAGCGCA GCGAGACGTT GTTGAAGCAG GACAATCCGC AGGCGCAGCA GGCCCTGGAT
GAACTGGACA GTGCGATCGG CCGGCTGGCT GCGCAGGCGC GGCTGAGCGC CTGA
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| Protein sequence | MLDRLGIRSR VLLLALLPAG LMALVLGSYF TWLQQNDLRT QLLQRGKMIA EQLAPLAAPA
MARLAPAQLE RIAAQTLEQA DVRAVAFLAP DRTRLAHAGP SMLNLPPSGG TGTQLLQRSG
NDATRYLMPV FGHHRDLATD AVPAEAERLL GWVEIELSHD GTLLRGYRNL FTSLLLIFAC
LVLSGLLALR MSRTINDPIE RIKHAVNQLK DGHLEERLPA MGSHELDELA RGINRMAETL
QNAHEELQHS IDQATEDVRQ NLETIEIQNI ELDMARKEAL EASRIKSEFL ANMSHEIRTP
LNGILGFTHL LQKSEMTPRQ LDYLSTIEKS ADNLLGIINE ILDFSKIEAG KLVLDSIPFN
LRDLIQDTLT ILAPAAHAKQ LELLSLIYRD TPSSLIGDPL RLKQILTNLV SNAIKFTREG
TIVVRAMLDD EHEDHAQLRI SVQDTGIGLS PQDVRTLFQA FSQADNSLAR QPGGTGLGLV
ISKRLIEQMG GEIGVDSTPG EGSQFWISLN LPKAHDDVEE LPLQPLLGRR AAIVDGHELA
RQALEHQLED CGLSVSLFAS YDQLLHGVQA ASQAGLPFEF AVLGANLGNL SPEQLGHYHQ
QLERYHCQCV VLCPTTEQAL YHPYLPNGHG QLLSKPTCTR KLRRLLLELV QPRRPLAEVN
NVNGQRQPKI LCVDDNAANL LLVQTLLEDL GAEVLAVDNG YAAVQAVQDE PFDLVLMDVQ
MPGMDGRACT EQIRLWENTQ SGNPLPIVAL TAHAMANEKR ALLHGGMDDY LTKPISERQL
AQVVMKWTGL SLGAPHQAQA ELPANGDELK VLDPEEGLRL AAGKADLAAD MLSMLLASLD
ADREAIRAAR EANDREGLIE QVHRLNGASR YCGVPQLRAA CQRSETLLKQ DNPQAQQALD
ELDSAIGRLA AQARLSA
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