| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1251 |
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| Symbol | |
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| ID | 5869011 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 1396180 |
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| End bp | 1397169 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641546350 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding |
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| Protein accession | YP_001667494 |
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| Protein GI | 167032263 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0000200659 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGCGCCC TGTTGTTCAG CAGCCAGCAC TACGACCAAG AAAGCTTCAC CGAGGCTGCC
AACGGCACGT CGCTGGAGCT GCATTTCCAG CCCGCCCGCC TGACCCTGGA CACCGCCGCA
CTGGCCGATG GTTTTGAGGT GGTGTGCGCC TTCATCAATG ACGAACTCGA CGCCACGGTG
CTGCAGCGCC TGGCCGCAGG TGGCACACGG CTGATCGCCC TGCGCTCGGC CGGCTACAAC
CACGTAGACC TGGCTGCCGC CCAGCGCCTA GGCCTGGCCG TGGTACGCGT GCCGGCCTAC
TCGCCACACG CCGTGGCCGA GCACGCCGTG GCGCTGATCC TGGCGCTCAA CCGGCGCCTG
CACAGAGCCT ACAACCGTAC CCGCGAAGGT GACTTCACCC TGCACGGGCT AACCGGCTTC
GACCTGCACG GCAAAACCGT GGGCGTGGTC GGCACCGGCC AGATCGGCGC CGCCTTCGCC
CGCATCATGG CAGGGTTCGG TTGCCAATTG CTGGCCTACG ACCCCTACCC CAACCCAGAG
CTGCTGGCCC TTGGCGCGCG TTACCTGCCC CTGCCCGAGC TGCTGCGCGA AGCCCGCATC
ATCAGCCTGC ACTGCCCGCT GACCGAACAC ACCCGCCACC TGATCAATGC GCAAAGCCTG
GCCCAGTTGC AGCCCGGCGC CATGCTGGTC AACACCGGTC GCGGCGCGCT GGTCGATACC
CCTGCGCTGA TTGACGCGCT GAAAAGCGGC CAGCTTGGCT ACCTGGGCCT GGACGTCTAC
GAAGAAGAAG CCCAGCTGTT CTTCGAGGAC CGCTCCGACC TGCCACTGCA GGACGATGTG
CTGGCCCGCC TGCTGACCTT CCCCAACGTG ATCATCACCG CCCACCAGGC CTTCCTCACC
CGCGAGGCGC TGGATGCCAT TGCCCAGACC ACGCTGGACA ACATCAACCG CTGGGCGGCA
GGCAATCCAC AGAATCTGGT GATGGGTTAG
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| Protein sequence | MRALLFSSQH YDQESFTEAA NGTSLELHFQ PARLTLDTAA LADGFEVVCA FINDELDATV
LQRLAAGGTR LIALRSAGYN HVDLAAAQRL GLAVVRVPAY SPHAVAEHAV ALILALNRRL
HRAYNRTREG DFTLHGLTGF DLHGKTVGVV GTGQIGAAFA RIMAGFGCQL LAYDPYPNPE
LLALGARYLP LPELLREARI ISLHCPLTEH TRHLINAQSL AQLQPGAMLV NTGRGALVDT
PALIDALKSG QLGYLGLDVY EEEAQLFFED RSDLPLQDDV LARLLTFPNV IITAHQAFLT
REALDAIAQT TLDNINRWAA GNPQNLVMG
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