| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1248 |
|---|
| Symbol | |
|---|
| ID | 5869008 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | + |
|---|
| Start bp | 1394811 |
|---|
| End bp | 1395275 |
|---|
| Gene Length | 465 bp |
|---|
| Protein Length | 154 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641546347 |
|---|
| Product | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen |
|---|
| Protein accession | YP_001667491 |
|---|
| Protein GI | 167032260 |
|---|
| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0526] Thiol-disulfide isomerase and thioredoxins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.0000147736 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAGGC GTCTGGCAGC AGTACTGGCC ATCACCGCGA GCCTGTTGCT CGGTGGTTGC
GGTGCCGATT ATGGCGTGGA CCAACACGGT AATACGGTTA AGGCCGAACA GATCGAAGGG
CACTGGCTGG TGCTCAATTA CTGGGCTGAA TGGTGCGGGC CGTGCCGTAC CGAGATCCCG
GAACTGAACG CAGCGGCCAA GCAGTGGGCG GCTGATGGCA TCAAGGTGGT GGGGGTGAAC
TTCGATGGTT TGCAGGGGCA GGACTTGAAG CAGGCCGCTG AAACCCTGGG TATCGGTTTC
ACCGTGCTGG CCCAGGACCC GGCCGAGCGC TATGACCTGC CGCGCAGCGA GGCGCTGCCG
GTGACCTACA TCATCGATGA CAAGGGCAAG GTGCGTGAGC AGTTGCTGGG CGAGCAGACG
CTGGAAGGGC TGCAAGCCAA GATCAAGGCG CTGAAAGGCG CCTGA
|
|---|
| Protein sequence | MARRLAAVLA ITASLLLGGC GADYGVDQHG NTVKAEQIEG HWLVLNYWAE WCGPCRTEIP
ELNAAAKQWA ADGIKVVGVN FDGLQGQDLK QAAETLGIGF TVLAQDPAER YDLPRSEALP
VTYIIDDKGK VREQLLGEQT LEGLQAKIKA LKGA
|
|---|
| |