Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_1245 |
Symbol | |
ID | 5869005 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 1393364 |
End bp | 1393759 |
Gene Length | 396 bp |
Protein Length | 131 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641546344 |
Product | hypothetical protein |
Protein accession | YP_001667488 |
Protein GI | 167032257 |
COG category | [S] Function unknown |
COG ID | [COG3308] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 45 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.00000160953 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGTTGCCGC CGCTGGAATG GCTGGCACCT CGCCTGCGCC TGACGCGGGC GTTGAGCCTG GCGTTCTTCT TCGGCCTGAT CGCCCTGCTG GTGGTGAACA ACCTGTGGTT CGCCAACCTG CATGGTGCGC GGGTCGAGGT GATCCTGGCG ATCGAACTGG TGCCGTTGCT GTTGCTGCTG CCAGGCATGC TGACAGGCAG CGCCCGGGCA CATGCCTGGA CCTGCTTCGT GGTGAATATC TATTTCATCA AGGGCGTGCT GGCGGCATTC GACCCGGCGC GAGCGGTATT TGGCTGGGTT GAAGTGCTGG TGAGCCTGGG GCTGTTCATT GCCGGGCTGC TCTATGTGCG CTGGAAGTTC CAGCATGAGC GGCGCCTGGC GGGCGAAGGC AGTTAG
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Protein sequence | MLPPLEWLAP RLRLTRALSL AFFFGLIALL VVNNLWFANL HGARVEVILA IELVPLLLLL PGMLTGSARA HAWTCFVVNI YFIKGVLAAF DPARAVFGWV EVLVSLGLFI AGLLYVRWKF QHERRLAGEG S
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