Gene PputGB1_1245 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_1245 
Symbol 
ID5869005 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp1393364 
End bp1393759 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content64% 
IMG OID641546344 
Producthypothetical protein 
Protein accessionYP_001667488 
Protein GI167032257 
COG category[S] Function unknown 
COG ID[COG3308] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00000160953 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGTTGCCGC CGCTGGAATG GCTGGCACCT CGCCTGCGCC TGACGCGGGC GTTGAGCCTG 
GCGTTCTTCT TCGGCCTGAT CGCCCTGCTG GTGGTGAACA ACCTGTGGTT CGCCAACCTG
CATGGTGCGC GGGTCGAGGT GATCCTGGCG ATCGAACTGG TGCCGTTGCT GTTGCTGCTG
CCAGGCATGC TGACAGGCAG CGCCCGGGCA CATGCCTGGA CCTGCTTCGT GGTGAATATC
TATTTCATCA AGGGCGTGCT GGCGGCATTC GACCCGGCGC GAGCGGTATT TGGCTGGGTT
GAAGTGCTGG TGAGCCTGGG GCTGTTCATT GCCGGGCTGC TCTATGTGCG CTGGAAGTTC
CAGCATGAGC GGCGCCTGGC GGGCGAAGGC AGTTAG
 
Protein sequence
MLPPLEWLAP RLRLTRALSL AFFFGLIALL VVNNLWFANL HGARVEVILA IELVPLLLLL 
PGMLTGSARA HAWTCFVVNI YFIKGVLAAF DPARAVFGWV EVLVSLGLFI AGLLYVRWKF
QHERRLAGEG S