Gene PputGB1_1219 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_1219 
Symbol 
ID5868979 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp1374949 
End bp1375518 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content59% 
IMG OID641546319 
Productglycoside hydrolase family protein 
Protein accessionYP_001667463 
Protein GI167032232 
COG category[R] General function prediction only 
COG ID[COG3179] Predicted chitinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.324918 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.000139257 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCTATCT CAGTTCAACA ACTGCAACAG ATCCTCCCCA ACGCCGGCCG CAAAGCCGGC 
GTTTTTGTTC CTGGCCTCAA CGCGACAATG GGCAAGTACT CGATCATCAC GCCCAAACGT
ATGGCCGCGT TCCTCGCCCA GGTCGGCCAT GAGTCTGGCC AGCTGCTGTA CGTGCGTGAG
CTCGGAAACG ATGCCTACTT GGCCAAGTAC GACACTGGAC GCCTGGCGGA GCGTCTCGGC
AATACCCCGG CGGCTGATGG TGATGGTCAG CGGTACCGTG GCCGTGGGCT GATTCAGATC
ACTGGGCGTG ACAACTACGA AGCATGCAGT GAGGCACTGT TCGGTGACAG TCGCTTGCTC
AATACCCCGG ACCTGCTCGA GCAGCCGGTT TATGCGTCGC TGTCGGCTGG TTGGTATTGG
CAGCGGACGG GTCTTAACAC CCTGGCTGAC AAGGTGCAGC AGGCCGATGA CTCAGTTTTC
GAGTCGATCA CCCGTCGCAT CAATGGTGGC CTGAACGGCT TGAAAGATCG CCAAGCGCTC
TACAAACGGG CGCTTGAGGT GCTGCAGTAA
 
Protein sequence
MPISVQQLQQ ILPNAGRKAG VFVPGLNATM GKYSIITPKR MAAFLAQVGH ESGQLLYVRE 
LGNDAYLAKY DTGRLAERLG NTPAADGDGQ RYRGRGLIQI TGRDNYEACS EALFGDSRLL
NTPDLLEQPV YASLSAGWYW QRTGLNTLAD KVQQADDSVF ESITRRINGG LNGLKDRQAL
YKRALEVLQ