| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1206 |
|---|
| Symbol | |
|---|
| ID | 5868966 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | + |
|---|
| Start bp | 1362662 |
|---|
| End bp | 1362988 |
|---|
| Gene Length | 327 bp |
|---|
| Protein Length | 108 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641546306 |
|---|
| Product | GPW/gp25 family protein |
|---|
| Protein accession | YP_001667450 |
|---|
| Protein GI | 167032219 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3628] Phage baseplate assembly protein W |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.0061315 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGATTGGTC TGGACCGCTG GACCGGCCAG CAATCCACCG GCCTCGATCA CCTGAAACAG
TCGATTGAGG ACATCCTGAC CACCCCATTG AAAAGCCGTC GTATGCGGCC GGAGTACGGC
TGCAACCTGC GCCGTTTTGT CGATATGCCG GTTAACGAAG GCTGGAAAAG CGCGGTACAG
GCCGAGGTGG CCCGCGCGCT GGGCCGCTGG GAGCCGCGCC TGCAGTTGGA GCGGGTCAAG
GTCGTTTCTG TGGTCGGGGG CCAGATTGGC CTGTTGCTGA CGGGCCAGTA CCTGGGCAAC
TCGGCCGTCC TGGAGGTAAG CGCATGA
|
|---|
| Protein sequence | MIGLDRWTGQ QSTGLDHLKQ SIEDILTTPL KSRRMRPEYG CNLRRFVDMP VNEGWKSAVQ
AEVARALGRW EPRLQLERVK VVSVVGGQIG LLLTGQYLGN SAVLEVSA
|
|---|
| |