| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1197 |
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| Symbol | |
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| ID | 5868957 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 1356243 |
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| End bp | 1357709 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641546297 |
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| Product | lambda family phage portal protein |
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| Protein accession | YP_001667441 |
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| Protein GI | 167032210 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5511] Bacteriophage capsid protein |
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| TIGRFAM ID | [TIGR01539] phage portal protein, lambda family |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0224747 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCTCG GCCGTTCCGG CATTTTGGTG CCCGAACGGA TTAAAGCCAG CTATGAAGGC
GCCGCCGAGG GGCGACGCTC GTCAGGGTGG GATGCGCCGG ATACCGGTGT GAACAGCCTG
ATCATGCCTG CCTTGCGCAA CCTGCGTTCC CGCTCGCGCA GTGCGGTGCG CAATGACCCA
TACGCCGCCA ACGTCATCGA CAAGCGTGTC AGCAACCTGA TCGGCACCGG CATTACGCCG
CATCCGCAGC TCGTCGACAA AGAAGTACGC AAGGCGATGC AGGTCCTGTG GGAGGACTGG
GTGGATGAGG CTGATGCCGA TCAGCTCACC GACTTCTATG GCCTGCAGGC TTTGGTGGCC
CGAACGGTGG AGCAGTCGGG CGAATGCTTC GTCCGCTTGC GTCCGCGCCG GCTGGAAGAT
GGTTACGCCG TACCTCTGCA ACTGCAGTGC CTGGCACCGG AGTTTGTCCC GCACGACAAG
TTCGAGGTGA CCCGCTTCGG CAATGTCATC CGCGCAGGGA TCGAGTTCAA CGGCATGGGG
CGGCGGGTGG CGTACTGGTG CTATCGCGTC CACCCCAGCG ACAAGTCCTC GCTGAATGTC
GGCTACAACC AGCTGGTGCG TGTCCCTGCC GAGCAGATGC TGCACATCTT CGAGCCCCTG
GAACCAGGGC AGCTGCGCGG TGTGCCGCGT CTGGCGCCCG TCCTGAAGCG CTTGCGCAGC
CTGGACAACT TCGACGATGC GGTGTTGTTC CGGCAGGAAG TGGCCAACCT GTTCGCAGGC
TTCGTGCGAA AGCCAGCGCC GGACGGTCGA CCACAGCTTG ATCCTATCAC CGGAGCGCCG
GTCGACCTCG ACCGGGACGG GTTCACCCCG ATGGTGGGGC TGGAGCCCGG CACGGTGCAG
GAGCTGGGGG CAGGCGAGGA GATCGAATTC TCCGACCCGC CGGACGCAGG CAACAACTAC
CGCGACTTCA TGCGGCAGCA ACTGGTGGCT GCTGCTGCCG GTACCGGCTT GCCTTACGAG
CTGATGACCG GCGACATGCA AGGCGTGAAC GACCGGGCGA TTCGCGTGGT TCTGAACGAG
TTCCGGCGCC GGCTGGAGCA GCTCCAGTTC CAGGTCTACG TCCACCAGTT GTGCCGTCCT
GTGCGGCAAG CCTGGTTGGA CATGGCCGTG CTGGCCGGGG CGCTCGACCT GCCGGACTAC
TCGGAGCGGC GCCGCGAATA CCGGCGCACC CGCTGGGTGC CGCAAGGCTG GGCCTACATC
CACCCCGTTC AAGACGTCCA GTCCCGGCAA ATGGAAATCG CTGCCGGTTT CACCACACGC
AGCGAGACTT GCTTGCGCAA CGGTACCGAT GCCGAGGTGG TGGACGAAGA GAACGCCGCC
GATCTCGCCC GGGCGCAGGG CCTGGGTATC AAGTACAGCA CTTTGTCGGC GGTCGATGAC
GATCCCGACG AGAAGGAGAA AGCATGA
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| Protein sequence | MSLGRSGILV PERIKASYEG AAEGRRSSGW DAPDTGVNSL IMPALRNLRS RSRSAVRNDP
YAANVIDKRV SNLIGTGITP HPQLVDKEVR KAMQVLWEDW VDEADADQLT DFYGLQALVA
RTVEQSGECF VRLRPRRLED GYAVPLQLQC LAPEFVPHDK FEVTRFGNVI RAGIEFNGMG
RRVAYWCYRV HPSDKSSLNV GYNQLVRVPA EQMLHIFEPL EPGQLRGVPR LAPVLKRLRS
LDNFDDAVLF RQEVANLFAG FVRKPAPDGR PQLDPITGAP VDLDRDGFTP MVGLEPGTVQ
ELGAGEEIEF SDPPDAGNNY RDFMRQQLVA AAAGTGLPYE LMTGDMQGVN DRAIRVVLNE
FRRRLEQLQF QVYVHQLCRP VRQAWLDMAV LAGALDLPDY SERRREYRRT RWVPQGWAYI
HPVQDVQSRQ MEIAAGFTTR SETCLRNGTD AEVVDEENAA DLARAQGLGI KYSTLSAVDD
DPDEKEKA
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