| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1195 |
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| Symbol | |
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| ID | 5868955 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 1353981 |
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| End bp | 1356023 |
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| Gene Length | 2043 bp |
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| Protein Length | 680 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641546295 |
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| Product | terminase GpA |
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| Protein accession | YP_001667439 |
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| Protein GI | 167032208 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5525] Bacteriophage tail assembly protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.992301 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.0460399 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCACCG GATACGCAGA CGGTGCCGAG GTGTACCGCG AAGCGTATTG CAGAGGGCTG
AAGCCTGACC CCGATTTGTG GGTCGACGAG TGGTCGGACG AGTACATGCG GATCCCGCGT
GATACCGGCG CCGCGGAGCC TGGCAAGTAC CGCACCGCGC GTACACCGTA CGCCCGCGAA
CCCATGCGCT GCCTGTCTCC AGCCCACCCG TGTAAGCGGG TAGTGACGAA GGTCGCATCG
CAGCTGATGA AAACGCAGAT TGCCCTCAAC TGGATCGGGG CGCTGATACA CATGGCGCCG
TCAAACATCT TGACGCTACT GCCCAGCCTG GGGCTTGCCA AACGGGTGTC TTCGCGGATC
GGTAAGACGA TCGATGCAAC GCCCGAACTC AAGGCGCGTG TGGCGGCTAA CCGCTCTAGG
GATGCCCGCA ACACCATGGA CACCAAGGAG TTCGAGGGTG GCACGTTGTT CGCCACCACG
GCCGGCTCGG CTGCCAACTT GTCAGAGCTG TCGGCGCGGT ACATCTACGG CGATGAGGTT
GATCGCTGGG ATGTCGACGT CGATCAAGAG GGCGACCCCA TCAAGCTGGC CGAAGCCAGG
GGCAGTACCT TCGGTCGCAA TGCCAAGTTC TATTTCTCCA GCTCACCACT CATCAAAGGG
GCGTCGCGGA TCGACGACCT CTTCATGATG GGCGACCAGC GCCACTTCTA CGTGCCGTGC
CCGACCTGTG GGCACATGCA GGTGCTCAGC TGGGACCGCC TGCTGTACTC GCCTGACTTC
GGCACCGTGC ACTACCAGTG CGCTGGCTCG GATTGTGATG TGCTGATCGA GGAGCACCAC
AAGAGCGAGA TGCTGGCTAA GGGCGAATGG CGCGCGCACG CGAAAGGTGA CGGCGAGACG
GTGAGCTTCC AGCTCAACGC GCTGTATGCC CCGCTGGGCT GGCACTCGTG GACGATGTTG
GCCCGCGAGT TCGAGGAAGC AAAGCGCGCT CAAGACCGCG GCGACCTGGA GCCCATGCAG
GTGTTCTACA ACACCCGCTT GGCTGAGGTC TGGGACAGTG CGATCGAGCA GACCAAGGCC
GAAGTGCTGC AGGCCCGCGC GCTGCAAGAA GACTATGTGC TCGGCACATT GCCAGTGGGA
GCTCTTGCGT TGACGGCCTC CGTCGACGTT CAGGCCAACC GCCTGGAGCT GATGGTCATG
GCTTGGGGTG CTGGCATGGA ACGCTGGGTG GTCGATCACC AGGTGATCCC CGGTGACCCG
GCCGACGAGC GCACTTGGGC GCTGCTCGAT GACCGTCTCA AGATTCGCTA CCGCCACCCT
TGCGGGGTAA GCCTGGCGAT CCTGGCCACT GGCATAGACT CCGGCGGCCA CCACACCCAC
GAGGTCTACC AGTTCACCCG CGTACGCCGT TGGCGCAACG TGTTTGCGCT CAAGGGGGCG
AGTAAGCCGG GCCGGCCTGT CATCGCCCAG CGCCCGTCGC AGGTGGACGT CACTTGGAAA
GGCCAGACCG AGCGAAACGG CGCTGAGTTG TGGATCGTCG GTACCGACAC GGCCAAAGAC
TGGATCTATA ACCGCTACAG CTTCGAGAAA GGCCCTGGTG CGCTGCACTT CGCCAAAGAC
CTGCCGGACG AGTTCTTCCA GCAGTGCGTT GCCGAACGCA AGATCGCGCG CTACGTGAAG
GGCTACAAGC GGATCGAGTG GGTCAAGAGC AAGGCCGAGC GCAACGAGGC GCTGGACCTC
ATGGTGTACA ACCTGGCGAT GGCCAACTTC CTCGGCCTGC ACCGGTACGT CGAAAACGAC
TGGGACAAGC TGCGGCAGGC GCTGGCGCAG GCCAGCCTGT TCGACCAGGG CGAGCAACAG
CCAGCCCGGC CCCAGGCCAG TGAGCCGGCG CCTGATGAAC AGGTAGAAGA CGATCCGTCG
CCACCCCCTG CACCAGCGCC GGCGAGGCGC AACGATCCGC CACCACCAAA GCCGGCCCCG
CCTGCCGCGC TCCAACCCAT GCAACGCCGC AGCTCCAGCA GCGGCTACCT GAAGAGACGC
TGA
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| Protein sequence | MPTGYADGAE VYREAYCRGL KPDPDLWVDE WSDEYMRIPR DTGAAEPGKY RTARTPYARE
PMRCLSPAHP CKRVVTKVAS QLMKTQIALN WIGALIHMAP SNILTLLPSL GLAKRVSSRI
GKTIDATPEL KARVAANRSR DARNTMDTKE FEGGTLFATT AGSAANLSEL SARYIYGDEV
DRWDVDVDQE GDPIKLAEAR GSTFGRNAKF YFSSSPLIKG ASRIDDLFMM GDQRHFYVPC
PTCGHMQVLS WDRLLYSPDF GTVHYQCAGS DCDVLIEEHH KSEMLAKGEW RAHAKGDGET
VSFQLNALYA PLGWHSWTML AREFEEAKRA QDRGDLEPMQ VFYNTRLAEV WDSAIEQTKA
EVLQARALQE DYVLGTLPVG ALALTASVDV QANRLELMVM AWGAGMERWV VDHQVIPGDP
ADERTWALLD DRLKIRYRHP CGVSLAILAT GIDSGGHHTH EVYQFTRVRR WRNVFALKGA
SKPGRPVIAQ RPSQVDVTWK GQTERNGAEL WIVGTDTAKD WIYNRYSFEK GPGALHFAKD
LPDEFFQQCV AERKIARYVK GYKRIEWVKS KAERNEALDL MVYNLAMANF LGLHRYVEND
WDKLRQALAQ ASLFDQGEQQ PARPQASEPA PDEQVEDDPS PPPAPAPARR NDPPPPKPAP
PAALQPMQRR SSSSGYLKRR
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