| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1179 |
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| Symbol | |
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| ID | 5868939 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 1336695 |
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| End bp | 1339337 |
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| Gene Length | 2643 bp |
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| Protein Length | 880 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641546279 |
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| Product | DNA mismatch repair protein MutS |
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| Protein accession | YP_001667423 |
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| Protein GI | 167032192 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0249] Mismatch repair ATPase (MutS family) |
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| TIGRFAM ID | [TIGR01070] DNA mismatch repair protein MutS |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.809456 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTACAAT GCCCCAATTT TGCCCCACCC TTGATCGAAA AACTCGCCAA GCCCTTGATG
AATAAAGCAA TTTCGGACTT CACCGCACAC ACACCGATGA TGCAGCAGTA CTGGAAGCTG
AAAAACCAGC ACCCAGACCA GCTGATGTTC TACCGCATGG GCGACTTCTA CGAAATCTTC
TACGAAGATG CGAAAAAAGC CGCGAAACTG CTGGATATCA CCTTGACCGC CCGCGGTCAG
TCGGCCGGCC AGTCCATTCC CATGTGCGGG ATCCCGTTCC ATTCGCTCGA AGGCTACCTG
GCCAAGCTGG TCAAGCTGGG CGAATCGGTG GTGATCTGTG AGCAGATTGG CGACCCAGCC
ACCAGCAAGG GCCCGGTGGA GCGCCAGGTG GTGCGCATCA TCACCCCTGG CACGGTCAGT
GACGAGGCCC TGCTCGACGA GCGCCGCGAC AACCTGATTG CCGCGCTGCT CGGCGACGAG
CGCCTGTTCG GCCTGGCCGT ACTGGACATC ACCAGCGGCA ACTTCAGCGT GCAGGAGATC
AAGGGCTGGG AAAACCTGCT GGCCGAGCTC GAGCGGCTGA ACCCGGTCGA GCTGTTGATC
CCGGACGACT GGCCGCGCGA TTTGCCTGCG GAGAAACGCC CTGGCGCCCG CCGCCGCGCA
CCGTGGGACT TCGACCGCGA CTCGGCGCGC AAGGCCCTGT GCCAGCAATT CGCGACCAAA
GACCTCAAAG GCTTCGGCTG CGACAAGCTG ACCCTGGCCA TCGGTGCCGC CGGCTGCCTG
CTGACCTACG CCAAGGAAAC CCAGCGCACC GCCCTGCCCC ACCTGCGCAG CCTGCGCCAC
GAGCGCCTGG ACGACACGGT CATCCTCGAT GGCGCCAGCC GCCGCAACCT GGAGCTGGAC
ATCAACCTGG CCGGCGGGCG CGACAACACC CTTCAGTCGG TGATCGACCG CTGCCAGACC
GCCATGGCCA GCCGCCTGCT GAGCCGCTGG CTGAACCGCC CGCTGCGCGA CCTCAAGGTA
CTGCAGGCAC GCCAGGATTC GATCCGCTGC CTGCTCGACA GCTATCGCTT CGAGAAGCTG
CAGCCGCAGT TGAAGGAAAT TGGCGATATC GAGCGGATCC TCGCTCGCAT CGGCCTGCGC
AATGCCCGCC CGCGCGACCT GGCGCGCCTG CGTGATGCCT TGGGCGCATT GCCCGAGCTG
CAGAACGCCA TGACCGAGCT CGAGGCACCG CACCTTGCGC GCCTGGCAGC CATCACCGGC
ACCTACCCGG AACTGGCCAG CCTGCTGGAG CGGGCGATCA TCGACAACCC GCCGGCGGTG
ATCCGCGACG GCGGCGTGCT CAAGGCCGGC TATGACAATG AGCTGGACGA CCTGCTGGCG
ATCAGCGAAA ACGCCGGCCA GTTCCTGATC GACCTGGAAG CCCGGGAAAA GGCTCGCACA
GGCCTTGCCA ACCTCAAGGT CGGCTACAAC CGCGTGCACG GCTACTTCAT CGAGCTACCG
ACCAAGCAGG CCGAGCAGGC CCCAGGCGAC TACATTCGCC GGCAGACGCT CAAGGGCGCC
GAGCGCTTCA TCACCCCGGA GCTGAAGGCA TTCGAGGACA AGGCACTGTC GGCCAAGAGC
CGCGCCCTGG CCCGCGAAAA AATGCTGTAC GACGCCCTGC TGGAAACCCT CATCAGCCAC
CTGGCGCCGC TGCAGGACAG CGCCGCTGCC CTGGCCGAAC TGGATGTACT CAGCAACCTG
GCCGAACGTG CACTGAACCT TGACCTGAAC TGCCCGCGCT TCGTCGACGA GCCGTGCCTG
CGCATCGTGC AAGGCCGCCA CCCGGTGGTG GAGCAGGTAT TGACCACGCC GTTCGTGGCC
AACGACCTGG GCCTGGACAA CAGCACACGC ATGCTGATCA TCACTGGCCC GAACATGGGC
GGTAAGTCCA CCTACATGCG CCAGACCGCC TTGATCGTGC TGCTGGCACA CATTGGCAGC
TTCGTGCCGG CGGCCAGCTG CGAGCTGTCG CTGGTCGACC GCATTTTCAC CCGCATCGGT
TCCAGCGATG ACCTGGCCGG CGGGCGCTCG ACGTTCATGG TCGAGATGAG CGAAACCGCC
AACATTCTGC ATAACGCCAC CGACCGCAGC CTGGTGCTGA TGGACGAAGT CGGCCGCGGC
ACCAGCACCT TCGACGGCTT GTCGCTGGCC TGGGCCGCCG CCGAGCGCCT GGCCCAGCTG
CGTGCCTACA CGCTGTTTGC CACGCACTAC TTCGAACTGA CCGTGCTGCC GGAGAGCGAG
CCGCTGGTGG CCAACGTGCA CCTGAACGCC ACCGAGCACA ACGAACGCAT CGTTTTCCTG
CACCACGTGC TGCCTGGCCC TGCCAGCCAG AGTTACGGCC TGGCCGTGGC GCAACTGGCC
GGCGTACCGA CAGTGGTCAT CCAGCGTGCC CGCGAACACC TGGGGCGCCT GGAAACCACC
AGCCTGCCGC ACGAGCAGCC CCCGGCCGCA AAAGCCAAGG ATGCGCCGCA GGTACCGCAC
CAAAGCGACC TGTTCGCCAG CCTGCCACAC CCGGCCATCG AGAAGCTGGG CAAGCTGCAG
CTGGACGACA TGACCCCGCG TCAAGCTATC GAAATGCTAT ATCAACTAAA GAACCTGTTA
TAA
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| Protein sequence | MVQCPNFAPP LIEKLAKPLM NKAISDFTAH TPMMQQYWKL KNQHPDQLMF YRMGDFYEIF
YEDAKKAAKL LDITLTARGQ SAGQSIPMCG IPFHSLEGYL AKLVKLGESV VICEQIGDPA
TSKGPVERQV VRIITPGTVS DEALLDERRD NLIAALLGDE RLFGLAVLDI TSGNFSVQEI
KGWENLLAEL ERLNPVELLI PDDWPRDLPA EKRPGARRRA PWDFDRDSAR KALCQQFATK
DLKGFGCDKL TLAIGAAGCL LTYAKETQRT ALPHLRSLRH ERLDDTVILD GASRRNLELD
INLAGGRDNT LQSVIDRCQT AMASRLLSRW LNRPLRDLKV LQARQDSIRC LLDSYRFEKL
QPQLKEIGDI ERILARIGLR NARPRDLARL RDALGALPEL QNAMTELEAP HLARLAAITG
TYPELASLLE RAIIDNPPAV IRDGGVLKAG YDNELDDLLA ISENAGQFLI DLEAREKART
GLANLKVGYN RVHGYFIELP TKQAEQAPGD YIRRQTLKGA ERFITPELKA FEDKALSAKS
RALAREKMLY DALLETLISH LAPLQDSAAA LAELDVLSNL AERALNLDLN CPRFVDEPCL
RIVQGRHPVV EQVLTTPFVA NDLGLDNSTR MLIITGPNMG GKSTYMRQTA LIVLLAHIGS
FVPAASCELS LVDRIFTRIG SSDDLAGGRS TFMVEMSETA NILHNATDRS LVLMDEVGRG
TSTFDGLSLA WAAAERLAQL RAYTLFATHY FELTVLPESE PLVANVHLNA TEHNERIVFL
HHVLPGPASQ SYGLAVAQLA GVPTVVIQRA REHLGRLETT SLPHEQPPAA KAKDAPQVPH
QSDLFASLPH PAIEKLGKLQ LDDMTPRQAI EMLYQLKNLL
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