Gene PputGB1_1175 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_1175 
Symbolpcm 
ID5868935 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp1332819 
End bp1333493 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content65% 
IMG OID641546275 
Productprotein-L-isoaspartate O-methyltransferase 
Protein accessionYP_001667419 
Protein GI167032188 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2518] Protein-L-isoaspartate carboxylmethyltransferase 
TIGRFAM ID[TIGR00080] protein-L-isoaspartate(D-aspartate) O-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.334554 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.339213 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGAGG ACGATATGCT GCGGCGTGGT ATCGGCATGA CCTCCCAGCG TACCCGGGAG 
CGGCTGATCC AGCGCCTGTG CGAAGAGGGT GTGTCGAATA CCAAGGTGCT CGACGTGATC
CGTCGTACCC CGCGCCACCT GTTCGTCGAC GAGGCGCTGG CACATCGCGC CTATGAAGAC
ACCGCGTTGC CGATCGGCCA CAACCAGACC ATCTCGCAAC CGTTCATGGT TGCCCACATG
AGCGAGCTGC TGCTCGAAGC CGGGCCGCTG GACAAGGTGC TGGAAATCGG CACCGGCTCG
GGTTACCAGA CGGCGATCCT GGCCCAGCTG GTCGAGCGGG TATTCTCGGT GGAGCGCATC
AAGGTATTGC AGGATCGGGC CAAAGAACGC CTGGTGGAGC TGAACCTGCG CAACGTGGTG
TTCCGCTGGG GCGATGGTTG CGAGGGATGG CCGGCATTGG CGCCGTACAA CGGCATCATC
GTCACTGCCG TGGCGCCGGA AGTGCCGCAG GCATTGCTCG ACCAGCTGGC ACCTGGAGGC
CGCATGGTCA TCCCGGTGGG GCCGGCCGGC GAAGCGCAGC AACTGATGCT GATCGTGCGC
GAGGAGCATG GGTTCTCCCG TCGCGTGCTG GGGGCTGTGC GTTTCGTGCC GCTGCTCAAT
GGTCCGTTGG CCTGA
 
Protein sequence
MREDDMLRRG IGMTSQRTRE RLIQRLCEEG VSNTKVLDVI RRTPRHLFVD EALAHRAYED 
TALPIGHNQT ISQPFMVAHM SELLLEAGPL DKVLEIGTGS GYQTAILAQL VERVFSVERI
KVLQDRAKER LVELNLRNVV FRWGDGCEGW PALAPYNGII VTAVAPEVPQ ALLDQLAPGG
RMVIPVGPAG EAQQLMLIVR EEHGFSRRVL GAVRFVPLLN GPLA