Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_1175 |
Symbol | pcm |
ID | 5868935 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 1332819 |
End bp | 1333493 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641546275 |
Product | protein-L-isoaspartate O-methyltransferase |
Protein accession | YP_001667419 |
Protein GI | 167032188 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG2518] Protein-L-isoaspartate carboxylmethyltransferase |
TIGRFAM ID | [TIGR00080] protein-L-isoaspartate(D-aspartate) O-methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.334554 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.339213 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCGAGG ACGATATGCT GCGGCGTGGT ATCGGCATGA CCTCCCAGCG TACCCGGGAG CGGCTGATCC AGCGCCTGTG CGAAGAGGGT GTGTCGAATA CCAAGGTGCT CGACGTGATC CGTCGTACCC CGCGCCACCT GTTCGTCGAC GAGGCGCTGG CACATCGCGC CTATGAAGAC ACCGCGTTGC CGATCGGCCA CAACCAGACC ATCTCGCAAC CGTTCATGGT TGCCCACATG AGCGAGCTGC TGCTCGAAGC CGGGCCGCTG GACAAGGTGC TGGAAATCGG CACCGGCTCG GGTTACCAGA CGGCGATCCT GGCCCAGCTG GTCGAGCGGG TATTCTCGGT GGAGCGCATC AAGGTATTGC AGGATCGGGC CAAAGAACGC CTGGTGGAGC TGAACCTGCG CAACGTGGTG TTCCGCTGGG GCGATGGTTG CGAGGGATGG CCGGCATTGG CGCCGTACAA CGGCATCATC GTCACTGCCG TGGCGCCGGA AGTGCCGCAG GCATTGCTCG ACCAGCTGGC ACCTGGAGGC CGCATGGTCA TCCCGGTGGG GCCGGCCGGC GAAGCGCAGC AACTGATGCT GATCGTGCGC GAGGAGCATG GGTTCTCCCG TCGCGTGCTG GGGGCTGTGC GTTTCGTGCC GCTGCTCAAT GGTCCGTTGG CCTGA
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Protein sequence | MREDDMLRRG IGMTSQRTRE RLIQRLCEEG VSNTKVLDVI RRTPRHLFVD EALAHRAYED TALPIGHNQT ISQPFMVAHM SELLLEAGPL DKVLEIGTGS GYQTAILAQL VERVFSVERI KVLQDRAKER LVELNLRNVV FRWGDGCEGW PALAPYNGII VTAVAPEVPQ ALLDQLAPGG RMVIPVGPAG EAQQLMLIVR EEHGFSRRVL GAVRFVPLLN GPLA
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