Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_1174 |
Symbol | surE |
ID | 5868934 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 1332070 |
End bp | 1332819 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641546274 |
Product | stationary phase survival protein SurE |
Protein accession | YP_001667418 |
Protein GI | 167032187 |
COG category | [R] General function prediction only |
COG ID | [COG0496] Predicted acid phosphatase |
TIGRFAM ID | [TIGR00087] 5'/3'-nucleotidase SurE |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 0.912952 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.346384 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTATTC TGATTTCGAA CGACGACGGT GTTACCGCAC CCGGCATCGC CGCGTTGCAC GCTGCGCTGG CGGATTACGC CGAGTGCGCG GTGATCGCCC CGGATCAAGA CAAGAGCGGC GCCAGCAGTT CGCTGACGCT GGACCGGCCA CTGCACCCGC AGACCCTGGC CAACGGCTTC ATCAGCCTCA ACGGCACGCC AACCGACTGT GTGCACCTGG GCCTCAATGG GTTGTTGCCA CAGGCGCCAG ACATGGTCGT GTCGGGGATC AACCTCGGTG CCAACCTGGG CGACGACGTG CTGTATTCGG GTACGGTCGC TGCGGCGTTG GAAGGCCGTT TCCTCGGCGG TACCTCGCTG GCGTTCTCGC TGTTGTCGCG CCAGCCGGAC AACCTGCCGA CCGCTGCCTA TATCGCCCGT CGATTGGTCG AGGCACAGTC GCGCCTGGCG CTGCCGCCCC GCACCGTACT CAACGTCAAT ATCCCCAACT TGCCGCTGGA GCACATCCGT GGCATCCAGC TCACCCGCCT CGGTCATCGG GCGCGGGCGG CGGCGCCGAC CAAGGTGGTC AACCCGCGCG GCAAGGAAGG CTACTGGATT GCCGTGGCCG GTGATGCCGA GGATGGGGGG CCGGGCACCG ACTTCCACGC GGTCATGCAG GGCTACGTAT CGATCACCCC GCTGCAACTC GATCGCACCT TCAATGATGC CTTCGAGCAG CTCGACGGTT GGCTGGAGGG CCTGCTCTGA
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Protein sequence | MRILISNDDG VTAPGIAALH AALADYAECA VIAPDQDKSG ASSSLTLDRP LHPQTLANGF ISLNGTPTDC VHLGLNGLLP QAPDMVVSGI NLGANLGDDV LYSGTVAAAL EGRFLGGTSL AFSLLSRQPD NLPTAAYIAR RLVEAQSRLA LPPRTVLNVN IPNLPLEHIR GIQLTRLGHR ARAAAPTKVV NPRGKEGYWI AVAGDAEDGG PGTDFHAVMQ GYVSITPLQL DRTFNDAFEQ LDGWLEGLL
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