Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_1171 |
Symbol | |
ID | 5868931 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 1329623 |
End bp | 1330477 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641546271 |
Product | S-formylglutathione hydrolase |
Protein accession | YP_001667415 |
Protein GI | 167032184 |
COG category | [R] General function prediction only |
COG ID | [COG0627] Predicted esterase |
TIGRFAM ID | [TIGR02821] S-formylglutathione hydrolase |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.441797 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCTGG ATAACATCTC CTGCCAGAAG AGCTTCGGCG GCTGGCACAA GCGTTACCGG CATCACTCCA AGGTGCTGGG TTGCGACATG GTGTTCGCCG TGTACCTGCC GCCGCAGGCC GAACAGGGTG AGAAGCTGCC GGTGTTGTAC TGGCTCAGTG GCCTCACCTG TACCGACGAG AACTTCATGC AGAAGGCCGG CGCTCAGCGC CTGGCCGCCG AGCTTGGGCT GATCATCGTC GCCCCCGACA CCAGCCCGCG TGGCGAGCAG GTGCCGGGCG ACCCGGATGG CGCGTGGGAC TTCGGCCTTG GGGCCGGCTT CTACCTCAAC GCCACCCAGC AGCCCTGGGC CCAGCATTAC CGCATGCATG ACTATGTGGT ACAGGAGTTG CCAGCCCTGA TCGAAGCGCA CTTCCCGGCG TCGGGCGAGC GCAGCATCAG CGGCCACTCC ATGGGCGGGC ATGGCGCGCT GGTGTGCGCC TTGCGCAACC CAGGGCGCTA CCGTTCGGTG TCGGCGTTTT CCCCCATCAG CAACCCGATG GATTGCCCGT GGGGCGAGAA AGCTTTCAGC CGCTACCTGG GTGAAGATCG GGCGCGCTGG CGCGAGTGGG ATGCCAGCGT GTTGCTGGCC GAAACCCCTG CCGGCGAGTG CCCGCCGTTG CTGGTTGACC AGGGCGACCG TGACGACTTT CTCGAGAAAC AGCTCAAGCC CGAAGCGCTG GAGCAGGCCG CACGCAAAGG GGGCCATGCA CTGACCCTGC GCCTGCAGCC GGGCTATGAC CATAGCTACT ACTTCATTGC CAGCTTCATC GAGGAGCACC TGCGCCATCA TGCGGTGGCA CTGGGGCGGG TGTAG
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Protein sequence | MSLDNISCQK SFGGWHKRYR HHSKVLGCDM VFAVYLPPQA EQGEKLPVLY WLSGLTCTDE NFMQKAGAQR LAAELGLIIV APDTSPRGEQ VPGDPDGAWD FGLGAGFYLN ATQQPWAQHY RMHDYVVQEL PALIEAHFPA SGERSISGHS MGGHGALVCA LRNPGRYRSV SAFSPISNPM DCPWGEKAFS RYLGEDRARW REWDASVLLA ETPAGECPPL LVDQGDRDDF LEKQLKPEAL EQAARKGGHA LTLRLQPGYD HSYYFIASFI EEHLRHHAVA LGRV
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