| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1159 |
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| Symbol | lpxB |
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| ID | 5868919 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 1314150 |
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| End bp | 1315277 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641546259 |
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| Product | lipid-A-disaccharide synthase |
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| Protein accession | YP_001667403 |
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| Protein GI | 167032172 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0763] Lipid A disaccharide synthetase |
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| TIGRFAM ID | [TIGR00215] lipid-A-disaccharide synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.649767 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCAGC TTTGCGTAGC GCTGGTCGCC GGTGAGGCCA GCGGCGATAT TCTGGGTTCA
GGCTTGATGC GTGCCCTCAA GGCACGTCAC CCTGATGTAC GTTTTATCGG CGTCGGCGGC
CCTTTGATGG AAGCCGAAGG CCTGCAATCC TATTTCCCCA TGGAGCGCCT GGCCGTCATG
GGCCTGGTCG AAGTACTGGG GCGCCTGCGC GAGCTGCTCA AGCGCCGCAA GCTATTGATC
CAGACGTTGA TCGACGAAAA ACCCGACGTT TTCATCGGTA TCGACGCCCC GGACTTCACC
CTCAATATCG AACTGAAACT GCGTCAGGCC GGCATCAAGA CCGTGCACTA CGTCAGCCCA
TCAGTGTGGG CCTGGCGGCA GAAGCGTGTG CTGAAGATTC GCGAAGGTTG CGACCTGATG
CTGACGCTGT TGCCGTTTGA GGCGCGCTTC TACGAAGAGC AAGGTGTACC GGTGCGCTTT
GTCGGCCACC CGCTGGCCGA CACCATCCCG CTTGAAGCTG ACCGCTCGGT CGCGCGTGCC
GCACTGGGCC TGGGCGAAGG GCCGATAGTG GCGCTGATGC CCGGTAGCCG GGGTGGTGAA
GTAGGGCGCT TGGGCGCGTT ATTCCTCGAT GCAGCCGAGC ACCTGTGTCA GCAGGTGCCG
GGTGTGCGCT TTGTGCTGCC CTGTGCCAAC GCTGCGCGGC GTGCCCAGGT CGAGCACATG
CTTGAAGGGC GCCAGCTGCC GCTGACCTTG CTCGATGGCC AGTCGCACCA AGCCCTGGCG
GCCTGTGACG CGGTGTTGAT CGCTTCGGGC ACCGCGACCC TCGAAGCGCT GCTGTACAAG
CGGCCGATGG TGGTGGCGTA CCGCCTGGCA CCGTTGACCT ACTGGATTCT CAAGCGCCTG
GTGAAAAGCC CCTACGTGTC GTTGCCGAAC CTGCTGGCCC AGCGCGAGCT GGTGCCCGAG
CTGCTGCAGG ACCAAGCCAC CAGCCAAGCG TTGGCCAACA CCCTTGCGCC GCTGGTGCGC
GATGGTAGCC AACAGACCGA ACGTTTCGAC GAAATTCACC GCACCCTGCG CCGTGACGCC
TCCAACCAGG CGGCCGAGGC GGTACTGGCC CTGCTCAAGG ACCGCTGA
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| Protein sequence | MAQLCVALVA GEASGDILGS GLMRALKARH PDVRFIGVGG PLMEAEGLQS YFPMERLAVM
GLVEVLGRLR ELLKRRKLLI QTLIDEKPDV FIGIDAPDFT LNIELKLRQA GIKTVHYVSP
SVWAWRQKRV LKIREGCDLM LTLLPFEARF YEEQGVPVRF VGHPLADTIP LEADRSVARA
ALGLGEGPIV ALMPGSRGGE VGRLGALFLD AAEHLCQQVP GVRFVLPCAN AARRAQVEHM
LEGRQLPLTL LDGQSHQALA ACDAVLIASG TATLEALLYK RPMVVAYRLA PLTYWILKRL
VKSPYVSLPN LLAQRELVPE LLQDQATSQA LANTLAPLVR DGSQQTERFD EIHRTLRRDA
SNQAAEAVLA LLKDR
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