| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1152 |
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| Symbol | |
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| ID | 5868912 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 1306163 |
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| End bp | 1307353 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641546252 |
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| Product | 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| Protein accession | YP_001667396 |
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| Protein GI | 167032165 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| TIGRFAM ID | [TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGTCGCC CGCAGCGTAT TACCGTGCTC GGGGCCACTG GCTCCATCGG CCTGAGCACG
CTGGATGTGA TCGCGCGGCA CCCTGATCGC TATCAGGCGT TTGCCCTCAG TGGCTATTCG
CGCGTCGACG AGCTGTTGGC GCTGTGCGTG CGTCATCGCC CGGCGTTCGC CGTGGTGCCG
AGCGCCGAGG CAGCCGCAAG GCTGCGCGCA AGCCTGGCTG CAGCCGGCTG CGCCACCGAG
GTGCTGGAAG GCGAGGCCGG GCTGTGCCAG GTGGCGTCGG CAGCGGAAGT GGATGCAGTG
ATGGCGGCCA TTGTCGGTGC CGCCGGCCTG CGCCCTACGC TGGCGGCTGT CGAGGCTGGC
AAGAAGGTAT TGCTGGCCAA CAAGGAAGCG CTGGTGATGT CGGGCGCGCT GTTCATGGAG
GCAGTGCGGC GCAGTGGCGC CGTGTTGCTG CCGATCGACA GTGAGCACAA CGCGATCTTT
CAGTGCATGC CTGGCGACTA CGCCCGAGGC TTGAGTGCCG TTGGTGTGCG CCGGATCCTG
CTGACCGCTT CCGGTGGTCC GTTCCGCGAG ACGCCGGTCG AGGCGTTGTT GGACGTGACC
CCGGAACAAG CCTGCGCGCA CCCTAACTGG TCCATGGGGC GCAAGATTTC CGTGGATTCG
GCCAGCATGA TGAACAAGGG GCTCGAACTG ATCGAAGCCT GCTGGCTGTT CGATGCTGCG
CCGGCCAAGG TCGAGGTGGT GGTGCACCCG CAGAGCGTGA TCCACTCGCT GGTCGACTAT
GTGGACGGGT CGGTGCTCGC GCAACTGGGC AACCCGGACA TGCGCACACC GATCGCCAAT
GCCTTGGCCT GGCCTGAACG GATCGACTCC GGGGTCGCGC CGCTGGACCT GTTCGCCATC
GCCCGTCTGG ATTTCCAGGC GCCCGACGAA CAACGCTTCC CTTGCCTGCG CCTGGCGCGG
CAGGCTGCCG AGGCCGGCAA TAGCGCGCCC GCCGTGCTCA ATGCGGCCAA CGAAGTGGCG
GTCGAGGCAT TTCTTGAGCG GCGTATCCGC TTCCCGGAGA TCGCGGGTAT GATCGAACAG
GTACTCGACC AGGAGCCCGT CGTGCCGCTG CCGTCGCTGG ACGCGGTGTT TGCCGCCGAT
CAGCGTGCCC GGGAGCTTTC CCGTGAGTGG CTGAGGCGTC ACGGTCGCTG A
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| Protein sequence | MSRPQRITVL GATGSIGLST LDVIARHPDR YQAFALSGYS RVDELLALCV RHRPAFAVVP
SAEAAARLRA SLAAAGCATE VLEGEAGLCQ VASAAEVDAV MAAIVGAAGL RPTLAAVEAG
KKVLLANKEA LVMSGALFME AVRRSGAVLL PIDSEHNAIF QCMPGDYARG LSAVGVRRIL
LTASGGPFRE TPVEALLDVT PEQACAHPNW SMGRKISVDS ASMMNKGLEL IEACWLFDAA
PAKVEVVVHP QSVIHSLVDY VDGSVLAQLG NPDMRTPIAN ALAWPERIDS GVAPLDLFAI
ARLDFQAPDE QRFPCLRLAR QAAEAGNSAP AVLNAANEVA VEAFLERRIR FPEIAGMIEQ
VLDQEPVVPL PSLDAVFAAD QRARELSREW LRRHGR
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