| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1150 |
|---|
| Symbol | |
|---|
| ID | 5868910 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | + |
|---|
| Start bp | 1304596 |
|---|
| End bp | 1305351 |
|---|
| Gene Length | 756 bp |
|---|
| Protein Length | 251 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641546250 |
|---|
| Product | undecaprenyl diphosphate synthase |
|---|
| Protein accession | YP_001667394 |
|---|
| Protein GI | 167032163 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0020] Undecaprenyl pyrophosphate synthase |
|---|
| TIGRFAM ID | [TIGR00055] undecaprenyl diphosphate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAAGA CCAAGCCAGC GGTGCCGTCC TCGGTGCCGC GTCATGTCGC GATCATCATG
GATGGCAACA ACCGCTGGGC GAAGAAACGC CTGCTGCCCG GCGTTGCCGG GCACAAGGCG
GGTGTCGACG CCGTTCGCGC GGTCATCGAA GTCTGTGCCA AGTCCGGGGT CGAGGTGCTG
ACCCTGTTCG CCTTCTCCAG CGAAAACTGG CAGCGCCCCG CCGAAGAAGT GGGTGCGCTG
ATGGAGTTGT TTTTCTCGGC CCTGCGCCGT GAGGCCAAGC GCCTCAATGA AAACAACATC
AGCCTGCGCA TCATCGGTGA CCGTTCGCGT TTCCACCCTG AGCTGCAGGC TGCCATGCGC
GAAGCCGAGG CAGTGACCGC CGGTAACAAT CGCTTCATCC TGCAGATTGC AGCCAACTAC
GGTGGCCAGT GGGACATCGC CCAGGCCGCC CAGCGGCTGG CGCGGGAAGT GCAAGCTGGG
CACCTGCGCC CGGAAGACAT CACCCCGGGC CTTTTGCAGG CCTGCCTGGC AACCGGCGAG
CTGCCATTGC CGGACTTGTG CATCCGCACC GGTGGCGAGC ACCGCATCAG TAATTTCCTG
CTGTGGCAGC TGGCCTATGC CGAGTTGTAT TTCTCCGACC TGTACTGGCC GGACTTCAAA
CACGAGGCCA TGCGCAATGC CCTGGCCGAT TTCGCTTCGC GCCAGCGCCG CTTTGGTAAG
ACCAGCGAGC AGGTCGAGGC TGGAGCTCGT GCTTAA
|
|---|
| Protein sequence | MEKTKPAVPS SVPRHVAIIM DGNNRWAKKR LLPGVAGHKA GVDAVRAVIE VCAKSGVEVL
TLFAFSSENW QRPAEEVGAL MELFFSALRR EAKRLNENNI SLRIIGDRSR FHPELQAAMR
EAEAVTAGNN RFILQIAANY GGQWDIAQAA QRLAREVQAG HLRPEDITPG LLQACLATGE
LPLPDLCIRT GGEHRISNFL LWQLAYAELY FSDLYWPDFK HEAMRNALAD FASRQRRFGK
TSEQVEAGAR A
|
|---|
| |