Gene PputGB1_1146 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_1146 
SymbolrpsB 
ID5868906 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp1301316 
End bp1302053 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content57% 
IMG OID641546246 
Product30S ribosomal protein S2 
Protein accessionYP_001667390 
Protein GI167032159 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0052] Ribosomal protein S2 
TIGRFAM ID[TIGR01011] ribosomal protein S2, bacterial type 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCAAG TCAATATGCG CGATATGCTG AAGGCCGGTG TGCACTTCGG CCACCAGACC 
CGTTACTGGA ACCCGAAAAT GGGCAAGTAC ATTTTCGGCG CGCGTAACAA GATCCACATC
ATCAACCTGG AAAAAACCCT GCCAATGTTC AACGACGCTC TGGCGTTCGT AGAGCGTCTG
GCTCAGGGCA AGAACAAGAT CATGTTCGTC GGCACCAAGC GTTCCGCCGG CAAGATCGTC
GCCGAGCAAG CTGCTCGCGC TGGTTCGCCA TACGTTGATC ACCGCTGGTT GGGCGGCATG
CTGACCAACT ACAAAACCAT CCGCGCTTCG ATCAAGCGTC TGCGCGACCT GGAAACCCAG
GCCGAAGACG GCACCTTTGC CAAGCTGACC AAGAAAGAAG CCCTGATGCG TTCGCGCGAT
CTGGAAAAGC TGGACCGCAG CCTGGGTGGT ATCAAGGACA TGGGCGGTCT GCCTGATGCC
CTGTTCGTGA TCGACGTTGA TCACGAGCGC ATTGCTATCA CCGAAGCAAA CAAGCTGGGC
ATCCCGGTTA TCGGCGTTGT CGATACCAAC AGCAGCCCGG AAGGTGTTGA CTACATCATC
CCAGGCAACG ACGACGCCAT CCGCGCCATC GAGCTGTACA TGACTTCGAT GGCTGACGCC
ATCATCCGCG GCCGCAACAA CGTTGCTGGC GGCACCGAAG TCTATGTTGA AGAAGCGGCT
GCACCTGCTG CTGAGTAA
 
Protein sequence
MSQVNMRDML KAGVHFGHQT RYWNPKMGKY IFGARNKIHI INLEKTLPMF NDALAFVERL 
AQGKNKIMFV GTKRSAGKIV AEQAARAGSP YVDHRWLGGM LTNYKTIRAS IKRLRDLETQ
AEDGTFAKLT KKEALMRSRD LEKLDRSLGG IKDMGGLPDA LFVIDVDHER IAITEANKLG
IPVIGVVDTN SSPEGVDYII PGNDDAIRAI ELYMTSMADA IIRGRNNVAG GTEVYVEEAA
APAAE