Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_1146 |
Symbol | rpsB |
ID | 5868906 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 1301316 |
End bp | 1302053 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641546246 |
Product | 30S ribosomal protein S2 |
Protein accession | YP_001667390 |
Protein GI | 167032159 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0052] Ribosomal protein S2 |
TIGRFAM ID | [TIGR01011] ribosomal protein S2, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCAAG TCAATATGCG CGATATGCTG AAGGCCGGTG TGCACTTCGG CCACCAGACC CGTTACTGGA ACCCGAAAAT GGGCAAGTAC ATTTTCGGCG CGCGTAACAA GATCCACATC ATCAACCTGG AAAAAACCCT GCCAATGTTC AACGACGCTC TGGCGTTCGT AGAGCGTCTG GCTCAGGGCA AGAACAAGAT CATGTTCGTC GGCACCAAGC GTTCCGCCGG CAAGATCGTC GCCGAGCAAG CTGCTCGCGC TGGTTCGCCA TACGTTGATC ACCGCTGGTT GGGCGGCATG CTGACCAACT ACAAAACCAT CCGCGCTTCG ATCAAGCGTC TGCGCGACCT GGAAACCCAG GCCGAAGACG GCACCTTTGC CAAGCTGACC AAGAAAGAAG CCCTGATGCG TTCGCGCGAT CTGGAAAAGC TGGACCGCAG CCTGGGTGGT ATCAAGGACA TGGGCGGTCT GCCTGATGCC CTGTTCGTGA TCGACGTTGA TCACGAGCGC ATTGCTATCA CCGAAGCAAA CAAGCTGGGC ATCCCGGTTA TCGGCGTTGT CGATACCAAC AGCAGCCCGG AAGGTGTTGA CTACATCATC CCAGGCAACG ACGACGCCAT CCGCGCCATC GAGCTGTACA TGACTTCGAT GGCTGACGCC ATCATCCGCG GCCGCAACAA CGTTGCTGGC GGCACCGAAG TCTATGTTGA AGAAGCGGCT GCACCTGCTG CTGAGTAA
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Protein sequence | MSQVNMRDML KAGVHFGHQT RYWNPKMGKY IFGARNKIHI INLEKTLPMF NDALAFVERL AQGKNKIMFV GTKRSAGKIV AEQAARAGSP YVDHRWLGGM LTNYKTIRAS IKRLRDLETQ AEDGTFAKLT KKEALMRSRD LEKLDRSLGG IKDMGGLPDA LFVIDVDHER IAITEANKLG IPVIGVVDTN SSPEGVDYII PGNDDAIRAI ELYMTSMADA IIRGRNNVAG GTEVYVEEAA APAAE
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