| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1143 |
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| Symbol | |
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| ID | 5868902 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 1296213 |
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| End bp | 1297412 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641546242 |
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| Product | succinyldiaminopimelate transaminase |
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| Protein accession | YP_001667387 |
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| Protein GI | 167032156 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
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| TIGRFAM ID | [TIGR03538] succinyldiaminopimelate transaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.385883 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.91788 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCATG CCTTGACCCA GCTTCAGCCT TACCCGTTCG AAAAGCTCCG CGCCCTGCTG
GGCAGCGTGA AGCCTGCGGC GGACAAACGC GCCATCGCCC TGTCGATCGG TGAGCCGAAG
CACGAATCGC CGGCGTTCGT CGCCCAGGCC ATGGCCGACA ACCTCGACAA GCTGGCGGTA
TACCCCAGCA CCCTCGGCTT GCCGGCCCTG CGCCAGGCTA TCGGCCAGTG GTGCGAACGG
CGCTTTGGCG TACCGGCCGG CTGGCTGGAT GCCGACCGCC ACATCCTGCC GGTAAACGGC
ACCCGTGAAG CCCTGTTCGC CTTCACCCAG GCCGTGGTCA ACCGTGCCGA TGACGGCCTG
GTCATCAGCC CCAACCCGTT CTACCAGATC TACGAAGGCG CAGCACTGCT GGCCGGTGCC
ACCCCGCACT ACCTGCCGTG CCTGGAAAGC AACGGCTTCA ACCCCGACTT CGACGCCGTC
CCGGCCGAGG TATGGAAGCG CTGCCAGGTC CTGTTCCTGT GCTCGCCAGG CAACCCCACC
GGCGCGCTGG TGCCGATGGA CACCCTGAAA AAGCTGATTG CACTGGCCGA TGAGCACGAC
TTCGTGATTG CGGCCGACGA ATGCTACAGC GAGCTGTACT TCGATGAGGA CGCACCGCCA
CCGGGCCTGC TGACCGCCTG CGCCGAACTG GGCCGCAGTG ACTTCAAGCG CTGCGTGGTG
TTCCACAGCC TGTCCAAGCG CTCCAACCTG CCGGGCCTGC GCTCGGGCTT CGTCGCTGGC
GATGCCGAGA TCATCAAGCC GTTCCTGCTG TACCGGACCT ACCACGGCTG TGCCATGCCC
GTGCAGACCC AACTGGCCAG CGTCGCCGCC TGGCAGGACG AGGCACATGT GCGCGCCAAC
CGCGACCAGT ACCGAGCCAA GTACGATGCC GTGCTGGATA TCCTGCAACC GGTGCTCGAC
GTACAACGCC CGGACGGCAG CTTCTACCTG TGGGCCAAGG TGCCGGGCAA CGACGATGCC
GCCTTCACCC GTGACCTGTT CGAAGCCGAA CACGTGACCG TGGTGCCAGG TTCGTACCTG
TCCCGCGAAG TCGACGGCGT GAACCCCGGT AGCGGGCGTG TGCGCATGGC CCTGGTTGCC
CCCCTGGCCG AGTGCATCGA GGCGGCGGAG CGTATTCGCG CGTTCTTGCA AAAGCGCTGA
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| Protein sequence | MNHALTQLQP YPFEKLRALL GSVKPAADKR AIALSIGEPK HESPAFVAQA MADNLDKLAV
YPSTLGLPAL RQAIGQWCER RFGVPAGWLD ADRHILPVNG TREALFAFTQ AVVNRADDGL
VISPNPFYQI YEGAALLAGA TPHYLPCLES NGFNPDFDAV PAEVWKRCQV LFLCSPGNPT
GALVPMDTLK KLIALADEHD FVIAADECYS ELYFDEDAPP PGLLTACAEL GRSDFKRCVV
FHSLSKRSNL PGLRSGFVAG DAEIIKPFLL YRTYHGCAMP VQTQLASVAA WQDEAHVRAN
RDQYRAKYDA VLDILQPVLD VQRPDGSFYL WAKVPGNDDA AFTRDLFEAE HVTVVPGSYL
SREVDGVNPG SGRVRMALVA PLAECIEAAE RIRAFLQKR
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