| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1138 |
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| Symbol | |
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| ID | 5868897 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 1291129 |
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| End bp | 1292334 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641546237 |
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| Product | aminotransferase class V |
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| Protein accession | YP_001667382 |
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| Protein GI | 167032151 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0520] Selenocysteine lyase |
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| TIGRFAM ID | [TIGR01979] cysteine desulfurases, SufS subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.787846 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCCAGC CCTCCCCCTG GCGTGCCGAC TTTCCCGCCA TCGCCGCCCT GCAACGGCAG
CACCAGACCT ACCTGGACAG CGCCGCCACC AGCCAGAAGC CGCAAGCCCT GCTCGATGCC
CTGAGCCATT ACTACGGCCA TGGCGCAGCC AACGTGCACC GTGCCCAGCA CTTGCCCGGT
GCGCTGGCGA CCCAGGCCTT CGAAACCAGC CGCGACAAGG TCGCCGCCTG GCTCAATGCC
GCAGACTCAC GGCAAGTGGT GTTCACCCAC GGCGCCACCT CGGCACTGAA CCTGCTGGCA
TACGGCCTGG AACACCGCCT CGAAGCCGGG GACGAAATTG CCGTCAGTGC CCTGGAGCAC
CATGCCAACC TGCTGCCCTG GCAACAGCTG GCGCACCGGC GCAACCTGCG CCTGGTGGTA
CTGCCGCTGG ACGCTCATGG TTGCATCGAC CTGAACCAGG CACTGCAACT GATCGGCCCG
CGCACCCGCG TGCTGGCAGT CAGCCAGCTG TCCAACGTAC TGGGTACCTG GCAACCGCTA
CCGGCGCTGT TGGCCCATGC CCGCGCCCAA GGCGCGCTGA CCGTGGTCGA TGGTGCCCAG
GGCGTGGTGC ACGGCCGCCA TGACGTGCAG CAACTGGGGT GCGACTTCTA TGTGTTTTCC
AGCCACAAGC TGTACGGCCC GGACGGCGTC GGCGTGCTTT ATGGCCACAG CCAAGCGCTG
GGGCTGCTGC GCCACTGGCA GTTCGGTGGC GAGATGGTGC AACTTGCCGA GTACCACAGC
GCCAGCTTCC GCCCGGCACC GCTGGGGTTC GAGGCAGGTA CGCCGCCCAT AGCCGGGGTG
ATCGGCCTTG GCGCAACCCT GGGCTACCTG GCCAGCCTCG ATGCCCAAGC GGTCGCGGCC
CACGAAACCA GCCTGCACCA GCACCTGCTG CGCGGCCTGG CTGACCGCGA AGGCGTGCGC
ATACTCGGTA CGCCACAGGC GGCCCTGGCC AGCTTCGTCA TCGAGGGCGT GCACAATGCC
GATATTGCCC ACTTGCTCAC CGAGCAAGGC ATTGCCGTGC GCGCCGGTCA CCACTGTGCC
ATGCCGCTGC TGAAAGGCTT GGGCCTGGAA GGCGCAATTC GGGTGTCGCT GGGCTTGTAC
AACGACAGCG ATGACTTGCA GCGCTTTTTC ACGGCGCTGG ATCAGGGCCT GGAGCTGCTG
CGATGA
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| Protein sequence | MFQPSPWRAD FPAIAALQRQ HQTYLDSAAT SQKPQALLDA LSHYYGHGAA NVHRAQHLPG
ALATQAFETS RDKVAAWLNA ADSRQVVFTH GATSALNLLA YGLEHRLEAG DEIAVSALEH
HANLLPWQQL AHRRNLRLVV LPLDAHGCID LNQALQLIGP RTRVLAVSQL SNVLGTWQPL
PALLAHARAQ GALTVVDGAQ GVVHGRHDVQ QLGCDFYVFS SHKLYGPDGV GVLYGHSQAL
GLLRHWQFGG EMVQLAEYHS ASFRPAPLGF EAGTPPIAGV IGLGATLGYL ASLDAQAVAA
HETSLHQHLL RGLADREGVR ILGTPQAALA SFVIEGVHNA DIAHLLTEQG IAVRAGHHCA
MPLLKGLGLE GAIRVSLGLY NDSDDLQRFF TALDQGLELL R
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