Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_1135 |
Symbol | |
ID | 5868894 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 1287042 |
End bp | 1289630 |
Gene Length | 2589 bp |
Protein Length | 862 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641546234 |
Product | glycosyl transferase family protein |
Protein accession | YP_001667379 |
Protein GI | 167032148 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG5309] Exo-beta-1,3-glucanase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.67659 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTTCAC GTAAATTCGG CCTGAACCTG GTTGTGGTGC TGGCCATCGC CGCGCTGTTC ACCGGGTTCT GGGCACTGAT CAACCGCCCG GTTTCCGCCC CCGCCTGGCC AGAGCAGATC TCTGGCTTTT CGTATTCGCC ATTCCGCCTG GGTGAAAGCC CGCAGAAGGG CCAGTACCCT ACTGACGACG AGATGCGCCA GGACCTGGAG CAGTTGAGCA AACTGACCGA CAGCATCCGT ATCTACACCG TGGAAGGCAC CCAGGCCGAC ATCCCGCGCC TGGCCGAGGA GTTCGGCCTG CGGGTGACGC TGGGCATCTG GATCAGCCCG GACCTGGAAC GCAACGAACG CGAAATCGCC ACCGCCATCG AGCTGGCCAA CACCTCGCGC AGTGTGGTGC GGGTAGTGGT CGGTAACGAG GCGCTATTCC GCGAAGAAGT CACCCCGGAA AACCTGATCA AATACCTGGA TCGGGTACGT GCGGCCGTAA AAGTGCCGGT GACCACCAGT GAGCAATGGC ACATCTGGAA GGAACACCCA GAACTGGCCA AGCACGTCGA CCTGATTGCC GCGCATATCC TGCCCTATTG GGAGTTCGTG CCGATGAAGG ACTCGGTCGA GTTCGTCCTC GACCGCGCCC GTGAGCTGAA GCACCAGTTC CCGCGCAAAC CCCTGCTGCT GTCGGAAGTC GGCTGGCCAA GCAACGGCCG CATGCGCGGG GGTGCCGATG CCACCCAGGC CGACCAGGCC ATCTACCTGC GCACCCTGGT CAACACCCTC AACCGCCGTG GCTACAACTA CTTTGTCATC GAAGCCTACG ACCAGCCGTG GAAAGCCAGC GACGAAGGCT CGGTAGGCGC CTACTGGGGC GTGTACAACG CCGAGCGCCA GCAGAAGTTC AACTTCGACG GCCCGGTGGT GGCGATCCCG CAGTGGCGTG CTCTGGCGGT GGCCTCGGTG GTGCTGGCGA TGATCGCCCT GATGGTGCTG TTCATCGACG GCTCGGCCCT GCGCCAGCGT GGCCGGACCT TCCTCACGTT CATCACCTTC CTGTGCGGGT CGGTGCTGGT GTGGATCGCC TACGACTACA GCCAGCAGTA CAGCACCTGG TTCAGCCTGA CCGTGGGCGT GCTGCTGGCC CTCGGTGCGC TGGGCGTGTT CATCGTGCTG CTCACCGAAG CCCACGAACT GGCCGAGGCC GTCTGGATAC ACAAGCGCCG CCGCGAGTTC CTGCCGGTGC AGGCCGACAG TGCCTACCGG CCCAAGGTGT CGGTGCATGT GCCGTGCTAC AACGAACCGC CAGAAATGGT GAAACAAACC CTCGACGCCC TGGCTGCCCT GGACTACCCC GATTACGAAG TGCTGGTGAT CGACAACAAC ACCAAGGACC CAGCCGTGTG GGAGCCGCTC AAGGCCCACT GCGAGAAGCT CGGCGAGCGC TTCAAGTTCT TCCACGTCGC GCCCCTGGCC GGTTTCAAGG GTGGCGCGCT GAACTACTTG ATCCCGCACA CGGCCAAGGA CGCCGAAGTG ATCGCGGTCA TCGACTCGGA CTACTGCGTC GACCGCAACT GGCTCAAGCA CATGGTGCCG CACTTCGCCG ACCCGAAAAT TGCCGTGGTG CAGTCGCCGC AGGACTACCG CGACCAGCAC GAAAGCGCCT TCAAGAAGTT GTGCTACAGC GAATACAAGG GCTTCTTCCA CATTGGCATG GTCACCCGCA ACGACCGTGA TGCGATCATC CAGCACGGCA CCATGACCAT GACCCGGCGC AGCGTGCTGC AAGAGCTGGG CTGGGCCGAG TGGTGCATCT GCGAGGACGC CGAACTGGGC CTGCGGGTAT TCGAGAAGGG CCTGTCGGCC GCCTATGCCC ACAACAGCTA CGGCAAAGGC CTGATGCCCG ACACCTTCAT CGACTTCAAG AAGCAGCGCT TCCGCTGGGC CTACGGCGCC ATCCAGATCA TCAAGCACCA CGCCGGCGCC CTGCTGCGCG GCAAGGGCAG TGAGCTGACC CGTGGCCAAC GCTATCACTT CCTGGCCGGC TGGCTGCCAT GGATCGCCGA TGGCATGAAC ATCTTCTTCA CCGTCGGTGC GTTGCTGTGG TCGGCGGCGA TGATCATCGT GCCGCACCGG GTCGACCCGC CACTGATGAT CTTCGCCATC CCGCCACTGG CGCTGTTCTT CTTCAAGGTC GGCAAAATCA TCTTCCTCTA CCGCCGTGCG GTGGGGGTGA ACCTGAAGGA TGCCTTTGCG GCGGCGCTGG CGGGGCTGGC GCTGTCACAT ACCATCGCCA AGGCGGTGCT GTACGGGTTC TTCACCAGCA GCATGCCGTT CTTCCGCACG CCAAAGAATG CCGACAGCCA CGGGTTGCTG GTGGCGATTT CCGAAGCGCG TGAAGAGCTG TTCATCATGT TGCTGCTGTG GGGGGCGGCG CTAGGCATCT ACCTGGTGCA GGGGCTGCCG AGCTCGGACA TGCGCTTCTG GGTGGCGATG CTGCTGGTAC AGTCGTTGCC TTATCTGGCG GCGCTGGTGA TGGCGTTCCT GTCATCGCTG CCCAAGCCTG CACCCCAGGT ACATCCCGCG CACACTTGA
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Protein sequence | MSSRKFGLNL VVVLAIAALF TGFWALINRP VSAPAWPEQI SGFSYSPFRL GESPQKGQYP TDDEMRQDLE QLSKLTDSIR IYTVEGTQAD IPRLAEEFGL RVTLGIWISP DLERNEREIA TAIELANTSR SVVRVVVGNE ALFREEVTPE NLIKYLDRVR AAVKVPVTTS EQWHIWKEHP ELAKHVDLIA AHILPYWEFV PMKDSVEFVL DRARELKHQF PRKPLLLSEV GWPSNGRMRG GADATQADQA IYLRTLVNTL NRRGYNYFVI EAYDQPWKAS DEGSVGAYWG VYNAERQQKF NFDGPVVAIP QWRALAVASV VLAMIALMVL FIDGSALRQR GRTFLTFITF LCGSVLVWIA YDYSQQYSTW FSLTVGVLLA LGALGVFIVL LTEAHELAEA VWIHKRRREF LPVQADSAYR PKVSVHVPCY NEPPEMVKQT LDALAALDYP DYEVLVIDNN TKDPAVWEPL KAHCEKLGER FKFFHVAPLA GFKGGALNYL IPHTAKDAEV IAVIDSDYCV DRNWLKHMVP HFADPKIAVV QSPQDYRDQH ESAFKKLCYS EYKGFFHIGM VTRNDRDAII QHGTMTMTRR SVLQELGWAE WCICEDAELG LRVFEKGLSA AYAHNSYGKG LMPDTFIDFK KQRFRWAYGA IQIIKHHAGA LLRGKGSELT RGQRYHFLAG WLPWIADGMN IFFTVGALLW SAAMIIVPHR VDPPLMIFAI PPLALFFFKV GKIIFLYRRA VGVNLKDAFA AALAGLALSH TIAKAVLYGF FTSSMPFFRT PKNADSHGLL VAISEAREEL FIMLLLWGAA LGIYLVQGLP SSDMRFWVAM LLVQSLPYLA ALVMAFLSSL PKPAPQVHPA HT
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