| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1122 |
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| Symbol | |
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| ID | 5868881 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 1271067 |
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| End bp | 1272167 |
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| Gene Length | 1101 bp |
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| Protein Length | 366 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641546221 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001667366 |
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| Protein GI | 167032135 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGCGCC ATGCCTTGTC CATCGCCTTG CCCGCCGCCG CCGTGCTGTT TCTGGCGGCG
TGCGGCCAGG AAGCCGCCCC ACCTGCCGCG CCCCGCCCGG CGCTGGTGGT GCAGCCGCAG
CCGGCCGCAG CCGCTGCCGA CAGTTACCCC GGTGAAGTGC GTGCGCGCTT CGAGCCGGAG
CTGGCTTTCC GCATTGGCGG CAAGGTCAGC AAGCGCTTGG TCGAAGAGGG CCAGCGGGTC
AAGGCCGACC AGCCGCTGGC CGAACTGGAC CCGCAAGACG TGCGCTTGCA ATTGGAAGCC
AACCGCGCCC AGATGGCGGC CGCCGAGGCC AACCTGTCGC TGGTGCGTGC CGAGCGCGAC
CGCTACCAGA AGCTGCTGGA GCGGCAGATG GTCAGCCACT CGCAGTACGA CAATGCCGAA
AACCTCTACC GTGCAGGCCT TGCCCGCTTG AAGCAGGCCA AGGCCGAGTT CGACGTGGCC
GGCAACCAGG CCGAGTACGC CGTGCTGCGT GCGCCACAGG CCGGGGTGAT TGCCAAGCGC
CAGGTTGAAG TGGGCCAGGT GGTCGCCGCC GGGCAGACCG TGTTCACCCT CGCCGCCGAT
GGCGAGCGGG AAGTGGCCAT CGGCCTGCCG GAGCAGCAGT TCGCCCGCTT TGCCGTGGGC
CAACCGGTAA GCGTGGAGCT GTGGTCGCAC CCGCAGGAGC GTTTCCAGGG GCGCATCCGC
GAGCTGTCAC CGGCTGCCGA CCCGCGTTCG CGCACCTTCG CGGCGCGTAT CGCCTTTGCC
ACGGCGGCCA CACCGGCCGA GCTGGGCCAG AGCGCCCGGG TGTTCATTGC CCATGAAGGC
CAGATCCCGC TGGCGGTACC GCTGTCGGCT GTGACGGCGG AAAACGGCCA GGCCTACGTG
TGGCGGGTGA ACAAGGACAG CCGCCTGGAG CGGGCAGTGG TGCGCTTGGG CGCCTACGGC
AGCGACAGCG TACCGGTGCT CGAGGGCCTT GCCCCCGGCG ACTGGGTGGT TGCCGCCGGT
GGCCATGTAC TGCGCGAGGG CCAGGCGGTA CGGCCTGTGG ACCGCAGCAA CCGTGTAGTG
AACCTGACGG CCAAGGAGTA A
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| Protein sequence | MLRHALSIAL PAAAVLFLAA CGQEAAPPAA PRPALVVQPQ PAAAAADSYP GEVRARFEPE
LAFRIGGKVS KRLVEEGQRV KADQPLAELD PQDVRLQLEA NRAQMAAAEA NLSLVRAERD
RYQKLLERQM VSHSQYDNAE NLYRAGLARL KQAKAEFDVA GNQAEYAVLR APQAGVIAKR
QVEVGQVVAA GQTVFTLAAD GEREVAIGLP EQQFARFAVG QPVSVELWSH PQERFQGRIR
ELSPAADPRS RTFAARIAFA TAATPAELGQ SARVFIAHEG QIPLAVPLSA VTAENGQAYV
WRVNKDSRLE RAVVRLGAYG SDSVPVLEGL APGDWVVAAG GHVLREGQAV RPVDRSNRVV
NLTAKE
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