| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1101 |
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| Symbol | lysS |
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| ID | 5868860 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 1250740 |
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| End bp | 1252242 |
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| Gene Length | 1503 bp |
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| Protein Length | 500 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641546200 |
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| Product | lysyl-tRNA synthetase |
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| Protein accession | YP_001667345 |
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| Protein GI | 167032114 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1190] Lysyl-tRNA synthetase (class II) |
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| TIGRFAM ID | [TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGACC TCAAGACCGA ATCGCAAGAC CTGCAACAGG AAGAAAATGC CCTGATCGCC
CTGCGCAAGG AAAAACTTGC CGCCGAGCGC GCCAAGGGCA ACGCCTTCCC CAACGACTTC
CGTCGCGACA GCTACTGCAA CGACCTGCAG AAACAGTACG CGGACAAGAC CAAGGAAGAG
CTGGAAGCAG CCGCGATCCC GGTCAAGGTT GCCGGCCGTA TCATGCTCAA CCGTGGCTCG
TTCATGGTTA TCCAGGACAT GACTGGCCGT ATCCAGGTCT ACGTCAACCG CAAAACCCTG
CCCGAAGAAA CCCTGGCTGC GGTCAAGACT TGGGACCTGG GCGACATCAT CAGTGCCGAA
GGCACCCTGG CCCGTTCCGG CAAGGGCGAC CTGTACGTCG AAATGACCAA TGTGCGCCTG
TTGACCAAGT CGCTGCGCCC GCTGCCCGAC AAGCACCACG GCCTGACCGA CACCGAGCAG
CGCTACCGTC AGCGTTACGT CGACCTGATG GTCAACGAAG AAACCCGCCA CACCTTCCGT
GTGCGTTCGC AGGTGATCTC GCACATCCGC AAGTTCCTCA TCGAGCGTGA CTTCCTCGAA
GTCGAAACGC CGATGCTGCA GACCATTCCA GGCGGCGCGG CGGCCAAGCC GTTCGAAACT
CACCACAACG CCCTGGACAT GGCCATGTTC CTGCGCATCG CGCCGGAGCT GTACCTCAAG
CGCCTGGTGG TGGGTGGCTT TGAAAAGGTG TTCGAGATCA ACCGCAACTT CCGTAACGAA
GGCGTTTCGA CTCGTCACAA CCCTGAATTC ACCATGCTCG AGTTCTACCA GGCCTACGCT
GACTACCGCG ACAACATGGA CCTCACCGAG GAACTGTTCC GTGAGCTGGC GCAGCTGGTA
CTGGGCAGCA CCGACGTGCC GTACGGTGAC AAGGTGTTCC ACTTTGGCGA GCCGTTCGTG
CGCCTGTCGG TGTTCGACTC GATCCTCAAG TACAACCCCG AGCTGACCGC TGCCGACCTG
CAGGACGTCG ACCGCGCCCG CGACATCGCC AAGAAGGCCG GTGCCAAGGT GCTGGGCCAC
GAAGGCCTGG GCAAGCTGCA GGTGATGATT TTCGAAGAAC TGGTCGAGCA CAAGCTGGAG
CAGCCGCACT TCATTACCGA GTACCCGTTC GAAGTGTCGC CGCTGGCCCG TCGCAACGAC
GACAACCCAG CCGTTACCGA CCGCTTCGAG CTGTTCATCG GTGGCCGTGA AATCGCCAAC
GCCTACTCCG AGCTCAACGA TGCCGAAGAC CAGGCCGAGC GCTTCCTGGC CCAGGTGGCC
GAGAAGGACG CCGGTGACGA CGAAGCCATG CACTACGACG CCGACTTCGT GCGTGCACTG
GAGTACGGCA TGCCGCCGAC CGCCGGTGAG GGTATCGGCA TCGACCGCCT GGTGATGCTG
CTGACCAACT CGCCGTCGAT CCGCGACGTG ATCCTGTTCC CGCACATGCG TCCGCAGGCC
TGA
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| Protein sequence | MSDLKTESQD LQQEENALIA LRKEKLAAER AKGNAFPNDF RRDSYCNDLQ KQYADKTKEE
LEAAAIPVKV AGRIMLNRGS FMVIQDMTGR IQVYVNRKTL PEETLAAVKT WDLGDIISAE
GTLARSGKGD LYVEMTNVRL LTKSLRPLPD KHHGLTDTEQ RYRQRYVDLM VNEETRHTFR
VRSQVISHIR KFLIERDFLE VETPMLQTIP GGAAAKPFET HHNALDMAMF LRIAPELYLK
RLVVGGFEKV FEINRNFRNE GVSTRHNPEF TMLEFYQAYA DYRDNMDLTE ELFRELAQLV
LGSTDVPYGD KVFHFGEPFV RLSVFDSILK YNPELTAADL QDVDRARDIA KKAGAKVLGH
EGLGKLQVMI FEELVEHKLE QPHFITEYPF EVSPLARRND DNPAVTDRFE LFIGGREIAN
AYSELNDAED QAERFLAQVA EKDAGDDEAM HYDADFVRAL EYGMPPTAGE GIGIDRLVML
LTNSPSIRDV ILFPHMRPQA
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