Gene PputGB1_1100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_1100 
Symbol 
ID5868859 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp1249732 
End bp1250646 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content62% 
IMG OID641546199 
Productpeptide chain release factor 2 
Protein accessionYP_001667344 
Protein GI167032113 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1186] Protein chain release factor B 
TIGRFAM ID[TIGR00020] peptide chain release factor 2 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGCGC AGGTGGTCGA GACCCTGGAC AAATTGTCCA ACGGCCTGGG TGACTGCCAG 
GACCTGCTCG ACATGGCCGT CGAGGAAAAT GACGAAAACG CCGTCGGCGA CGTCGTGGCC
GAGCTGGAAG AGCTGGAAGA AAACCTGGCC AAGCTTGAGT TCCGTCGCAT GTTCAGCGGC
GAGATGGACA TGAACAACGC CTACCTGGAC ATCCAGGCCG GCTCTGGTGG TACCGAAGCG
CAGGACTGGG CCAACATCCT GCTGCGCATG TACCTGCGCT GGGCTGACAA GCGCGGTTTC
GACGCCACCA TCATCGAGCT TTCCGAAGGT GAAGTCGCCG GCATCAAGGG CGCCACCGTG
CACATCAAGG GCGAGTACGC CTTCGGCTGG CTGCGTACCG AAATCGGTGT GCACCGCCTG
GTGCGCAAGA GCCCGTTCGA CTCCGGTGCC CGTCGCCACA CCTCGTTCTC GGCAGTGTTC
GTGTCGCCCG AAATCGACGA CAAGGTCGAG ATCGAGATCA ACCCGTCCGA CCTGCGCATT
GACACCTACC GCTCCTCCGG TGCCGGTGGT CAGCACGTGA ACACCACCGA CTCGGCCGTA
CGTATCACCC ACGTACCGAC CAACACCGTG GTGGCGTGCC AGAACGAACG CTCCCAGCAC
GCCAACAAAG ACACCGCCAT GAAAATGCTG CGGGCCAAGT TGTACGAGCT GGAAATGCAG
AAGCGCAACG CCGCATCGCA GGCGCTGGAA GACAGCAAGT CGGACATCGG CTGGGGCCAC
CAGATCCGTT CCTACGTACT GGATGACTCG CGCATCAAAG ACCTGCGCAC AGGCGTAGAG
CGCAGCGACT GCCAGAAAGT GCTGGACGGC GACCTCGACC AGTACCTGGA AGCAAGCCTC
AAGCAAGGGC TGTAA
 
Protein sequence
MLAQVVETLD KLSNGLGDCQ DLLDMAVEEN DENAVGDVVA ELEELEENLA KLEFRRMFSG 
EMDMNNAYLD IQAGSGGTEA QDWANILLRM YLRWADKRGF DATIIELSEG EVAGIKGATV
HIKGEYAFGW LRTEIGVHRL VRKSPFDSGA RRHTSFSAVF VSPEIDDKVE IEINPSDLRI
DTYRSSGAGG QHVNTTDSAV RITHVPTNTV VACQNERSQH ANKDTAMKML RAKLYELEMQ
KRNAASQALE DSKSDIGWGH QIRSYVLDDS RIKDLRTGVE RSDCQKVLDG DLDQYLEASL
KQGL