Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_1100 |
Symbol | |
ID | 5868859 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 1249732 |
End bp | 1250646 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641546199 |
Product | peptide chain release factor 2 |
Protein accession | YP_001667344 |
Protein GI | 167032113 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1186] Protein chain release factor B |
TIGRFAM ID | [TIGR00020] peptide chain release factor 2 |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGGCGC AGGTGGTCGA GACCCTGGAC AAATTGTCCA ACGGCCTGGG TGACTGCCAG GACCTGCTCG ACATGGCCGT CGAGGAAAAT GACGAAAACG CCGTCGGCGA CGTCGTGGCC GAGCTGGAAG AGCTGGAAGA AAACCTGGCC AAGCTTGAGT TCCGTCGCAT GTTCAGCGGC GAGATGGACA TGAACAACGC CTACCTGGAC ATCCAGGCCG GCTCTGGTGG TACCGAAGCG CAGGACTGGG CCAACATCCT GCTGCGCATG TACCTGCGCT GGGCTGACAA GCGCGGTTTC GACGCCACCA TCATCGAGCT TTCCGAAGGT GAAGTCGCCG GCATCAAGGG CGCCACCGTG CACATCAAGG GCGAGTACGC CTTCGGCTGG CTGCGTACCG AAATCGGTGT GCACCGCCTG GTGCGCAAGA GCCCGTTCGA CTCCGGTGCC CGTCGCCACA CCTCGTTCTC GGCAGTGTTC GTGTCGCCCG AAATCGACGA CAAGGTCGAG ATCGAGATCA ACCCGTCCGA CCTGCGCATT GACACCTACC GCTCCTCCGG TGCCGGTGGT CAGCACGTGA ACACCACCGA CTCGGCCGTA CGTATCACCC ACGTACCGAC CAACACCGTG GTGGCGTGCC AGAACGAACG CTCCCAGCAC GCCAACAAAG ACACCGCCAT GAAAATGCTG CGGGCCAAGT TGTACGAGCT GGAAATGCAG AAGCGCAACG CCGCATCGCA GGCGCTGGAA GACAGCAAGT CGGACATCGG CTGGGGCCAC CAGATCCGTT CCTACGTACT GGATGACTCG CGCATCAAAG ACCTGCGCAC AGGCGTAGAG CGCAGCGACT GCCAGAAAGT GCTGGACGGC GACCTCGACC AGTACCTGGA AGCAAGCCTC AAGCAAGGGC TGTAA
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Protein sequence | MLAQVVETLD KLSNGLGDCQ DLLDMAVEEN DENAVGDVVA ELEELEENLA KLEFRRMFSG EMDMNNAYLD IQAGSGGTEA QDWANILLRM YLRWADKRGF DATIIELSEG EVAGIKGATV HIKGEYAFGW LRTEIGVHRL VRKSPFDSGA RRHTSFSAVF VSPEIDDKVE IEINPSDLRI DTYRSSGAGG QHVNTTDSAV RITHVPTNTV VACQNERSQH ANKDTAMKML RAKLYELEMQ KRNAASQALE DSKSDIGWGH QIRSYVLDDS RIKDLRTGVE RSDCQKVLDG DLDQYLEASL KQGL
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