| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1099 |
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| Symbol | |
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| ID | 5868858 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 1248415 |
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| End bp | 1249419 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641546198 |
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| Product | response regulator receiver modulated diguanylate cyclase |
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| Protein accession | YP_001667343 |
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| Protein GI | 167032112 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGACT TACCGATCGA AGGTTTCGCG ACCACCAACG AGAACTCGGC GATGGTGCTG
TTGGTCGACG ATCAGGCAAT GATCGGCGAA GCGGTGCGGC GTGGTCTGGC CAATGAGGAC
AACATCGACT TCCACTTCTG TGCCGACCCG CACCAGGCGG TGCTTCAGGC CATGCGCATC
AAGCCTACGG TCATTCTCCA GGACCTGATC ATGCCTGGCC TGGACGGTTT GACCCTGGTG
CGCGAGTACC GCAACAACCC GGCGACCCAG GACATTCCGA TCATCGTCCT GTCGACCAAG
GAAGACCCAC TGGTCAAGAG CGCGGCGTTT GCCGCCGGGG CCAACGATTA CCTGGTCAAG
CTGCCGGACA CCATCGAACT GGTGGCGCGT ATCCGCTACC ACTCGCGCTC CTACCTGACG
CTGCTGCAGC GCGACGAGGC CTACCGCGCC TTGCGCGTCA GCCAGCAGCA ACTGCTCGAT
TCCAACCTGA TGCTGCAGCG GCTGATGAAC TCCGATGGCC TGACCGGGCT GTCCAACCGC
CGCCATTTCG ACGAGTACCT GGAGCTGGAA TGGCGCCGGG CGATGCGTGA ACAGCAGCAG
CTGTCGTTGC TGATGATCGA CGTGGACTAC TTCAAGGCCT ATAACGACAG CTTCGGCCAC
CTGGCCGGCG ACGAGGCCTT GCGCCAGGTG GCCGAAGCCA TTCGTGGCTC GTGCTCGCGG
CCGACCGACC TGCCGGCGCG CTATGGCGGT GAAGAGTTCG CCCTGGTGCT GCCCAACACC
TCGCCAGGCG GGGCACGCCT GGTGGCCGAA AAGCTGCGCC AGACCGTGCT TGGCCTGGGC
ATCCCGCATA CTGCGCCGGT GGCCGAATCG TTCCTGACCG TGAGCATTGG CCTGGCTACC
CAGACCCCGG CCGTCGGCAG CCATTGCCGG CAGCTGATCT CGGCAGCGGA CAAAGGCCTG
TACCAAGCCA AGAACAGCGG GCGTAATCAG GTTGGCATCG CCTGA
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| Protein sequence | MNDLPIEGFA TTNENSAMVL LVDDQAMIGE AVRRGLANED NIDFHFCADP HQAVLQAMRI
KPTVILQDLI MPGLDGLTLV REYRNNPATQ DIPIIVLSTK EDPLVKSAAF AAGANDYLVK
LPDTIELVAR IRYHSRSYLT LLQRDEAYRA LRVSQQQLLD SNLMLQRLMN SDGLTGLSNR
RHFDEYLELE WRRAMREQQQ LSLLMIDVDY FKAYNDSFGH LAGDEALRQV AEAIRGSCSR
PTDLPARYGG EEFALVLPNT SPGGARLVAE KLRQTVLGLG IPHTAPVAES FLTVSIGLAT
QTPAVGSHCR QLISAADKGL YQAKNSGRNQ VGIA
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