| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1090 |
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| Symbol | |
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| ID | 5868849 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 1237657 |
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| End bp | 1238766 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641546189 |
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| Product | spermidine/putrescine ABC transporter ATPase subunit |
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| Protein accession | YP_001667334 |
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| Protein GI | 167032103 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | [TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.460702 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.589636 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGATC CTGCCTTTTC GCGGGTTTAC CCGCGCAAAG GCAGGATCAG GAGCAAGCCC
ATTGCCCGGA GCCCACGCAT GCCCCTAGCC GTCCAGTTCA CCCAGGTTTC CCGCACCTTC
GGCGAGGTCA AGGCCGTCGA CCAGGTCAGC ATCGATATCA TCGATGGCGA GTTCTTCTCC
ATGCTTGGCC CTTCCGGCTC GGGTAAGACC ACTTGCCTGC GCCTGATCGC CGGCTTCGAA
CAACCCTCCA GCGGTTCGAT CCGCATCCAC GGGGTGGAGG CCGCTGGCAT GCCGCCCTAC
CAACGTGACG TCAACACCGT GTTCCAGGAC TACGCACTGT TCCCGCACAT GAACGTGTTG
GACAACATCG CCTATGGCCT GAAGGTAAAG GGCGTGGCCA AGGCCGAACG CCATAGTCGC
GCCGAAGAAG CCCTGGCCAT GGTGGCCCTG GCCGGCTACG GCACGCGCAA ACCAGCGCAA
CTGTCTGGCG GCCAGCGCCA GCGTGTGGCC CTGGCCCGTG CACTGGTCAA CCGGCCGCGC
GTGCTGCTGC TGGACGAGCC GCTGGGCGCA CTGGACCTGA AGTTGCGCGA ACAGATGCAA
GGGGAGCTGA AAAAGCTGCA ACGCCAGCTG GGCATCACCT TCATCTTCGT CACCCACGAC
CAGACCGAAG CGCTGTCGAT GTCCGACCGG GTCGCGGTGT TCAACCGTGG CCGCATCGAA
CAGGTCGACA CCCCGCGCAA TCTGTACATG AAGCCCGCCA CCACCTTCGT CGCCGAATTC
GTCGGCACCT CCAACGTGGT ACGTGGCGAG CTGGCCATGC AGCTCAACGG CAGCCCGGCC
CCCTTCTCCA TCCGTCCCGA GCACATCCGC CTGGGCGACC TTGTGGTCAC CAGCCACGAA
GTGCAGGTAA GCGGCCTGTT GCGCGATATC CAGTACCAGG GCAGCGCCAC CCGCTACGAG
CTGCAATTGG ACAACGGCCA ACTGCTGGCG GTAAGCCAGG CCAACGACCG CTGGCAGGCA
CAGGCACAGG CCTGGCAGAC CGGGCAGCGG CTGCAGGCGC ACTGGCCCCG CGAGGCAATG
ACGGTGCTGC AGGAAACCGA GGGCCGCTGA
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| Protein sequence | MPDPAFSRVY PRKGRIRSKP IARSPRMPLA VQFTQVSRTF GEVKAVDQVS IDIIDGEFFS
MLGPSGSGKT TCLRLIAGFE QPSSGSIRIH GVEAAGMPPY QRDVNTVFQD YALFPHMNVL
DNIAYGLKVK GVAKAERHSR AEEALAMVAL AGYGTRKPAQ LSGGQRQRVA LARALVNRPR
VLLLDEPLGA LDLKLREQMQ GELKKLQRQL GITFIFVTHD QTEALSMSDR VAVFNRGRIE
QVDTPRNLYM KPATTFVAEF VGTSNVVRGE LAMQLNGSPA PFSIRPEHIR LGDLVVTSHE
VQVSGLLRDI QYQGSATRYE LQLDNGQLLA VSQANDRWQA QAQAWQTGQR LQAHWPREAM
TVLQETEGR
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