Gene PputGB1_1086 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_1086 
Symbol 
ID5868845 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp1233330 
End bp1234436 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content64% 
IMG OID641546185 
ProductNADH:flavin oxidoreductase/NADH oxidase 
Protein accessionYP_001667330 
Protein GI167032099 
COG category[C] Energy production and conversion 
COG ID[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.607736 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTGC TGCTTGAGCC TTACACCCTG CGTCAGCTGA CCCTGCCCAA CCGCATCGCC 
GTCTCGCCGA TGTGCCAGTA TTCCGCTATC GATGGCCTGG CCAACGATTG GCACCTTGTC
CATTTAGGCA GCCGCGCCGT TGGTGGTGCG GGCCTGGTGA TCACCGAAGC CGTGGCGGTC
ACCGCCGATG GCCGCATCAC CGCCGAAGAC CTCGGCCTGT GGGACGACAC GCAGATCGCC
CCGTTGCAAC GCATCACTCG CTTCATCACC GCCCAAGGCG CCGTGCCCGG TATCCAGCTG
GCACACGCCG GGCGCAAGGC CAGCACCTAT CGCCCATGGC TGGGCAGGCA GGGTAGTGTG
AAGCTCGAAG ACGGCGGGTG GCAGCCGGTG GGCCCTTCGA AGATCGCCTT CGACCCGCAG
CACACAGCGC CACGCGAGCT GACCGAGAAC GAGATCCAGG GTGTTATCGA CGCCTTCGTT
GCCTCGACTG AGCGCGCCTT GAAGGCCGGT TTCAAGGTGG TGGAAATTCA TGCTGCCCAT
GGCTACCTGT TGCACCAGTT CCTCTCGCCG CTGAGTAACC AACGCCGCGA CGAGTACGGC
AGCTGCTTCG AAAACCGCAT CCGCCTGACC TTGCAAGTGG TGGAGGCCGT GCGCAAGGTC
TGGCCGGCCG AGTTGCCATT GTTCGTGCGG GTATCGGCAA CCGATTGGGT CGAAGATGGC
TGGAACCCCG ATGAAACCGT TGAACTGGCC CGACGTCTGC GAGGGTTGGG CGTAGACCTG
ATCGATGTGT CCTCTGGCGG GACCTCGGTA AACGCCGAAA TCCCCACCGG CCCTGGCTAT
CAGACCCGCT TCGCCGAGCG CGTGCGCAAG GAATCGGAAA TCGCCACCGG CACCGTGGGC
ATGATCACCG AACCGGCCCA GGCCGAGCAT ATTTTGCGCA CCGGCCAGGC CGATATCATC
TTCCTCGCCC GTGAACTGCT GCGCGACCCG TACTGGCCGC TGCATGCCGA CGATGACCTG
GGCGGCAACA AGGCGACCTG GCCTGCGCAA TACCAGCGCG CGACCAGCCG GGCCAACCCG
ATTCACGAGT CGGATCTGCG GGACTGA
 
Protein sequence
MSLLLEPYTL RQLTLPNRIA VSPMCQYSAI DGLANDWHLV HLGSRAVGGA GLVITEAVAV 
TADGRITAED LGLWDDTQIA PLQRITRFIT AQGAVPGIQL AHAGRKASTY RPWLGRQGSV
KLEDGGWQPV GPSKIAFDPQ HTAPRELTEN EIQGVIDAFV ASTERALKAG FKVVEIHAAH
GYLLHQFLSP LSNQRRDEYG SCFENRIRLT LQVVEAVRKV WPAELPLFVR VSATDWVEDG
WNPDETVELA RRLRGLGVDL IDVSSGGTSV NAEIPTGPGY QTRFAERVRK ESEIATGTVG
MITEPAQAEH ILRTGQADII FLARELLRDP YWPLHADDDL GGNKATWPAQ YQRATSRANP
IHESDLRD