| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1082 |
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| Symbol | |
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| ID | 5868841 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 1228169 |
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| End bp | 1229878 |
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| Gene Length | 1710 bp |
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| Protein Length | 569 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641546181 |
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| Product | single-stranded-DNA-specific exonuclease RecJ |
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| Protein accession | YP_001667326 |
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| Protein GI | 167032095 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
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| TIGRFAM ID | [TIGR00644] single-stranded-DNA-specific exonuclease RecJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCATCG AACCTCGCCC TCTGCCGCCG ACCCTGCCAT TTCTGGGTAA TCTGCCACCT
TTGCTCACCC GTCTGTACGC CGCGCGCGGC GTGCAGAGCG AGGCCGAGCT GGACAAAAGC
CTGGCGCGCC TGCTGCCGTA CCAGCAGCTA AAGGGCATCG AGGCAGGTGT CGACCTGCTG
GTCGAGGCGC TCGACCAGCG CCAGCGTATC CTCATTGTTG GCGATTTCGA TGCCGACGGT
GCCACCGCAA GCACCGTAGG GGTGCTGGGC CTGCGCCTAC TGGGTGCGGC CCATGTCGAT
TACCTGGTAC CCAACCGCTT CGAGTATGGC TATGGCCTGA CCCCGGAAAT CGTCGAAGTG
GCGCTGCAAC GCCAGCCGCA ACTGCTGATT ACCGTGGACA ATGGCATTTC CAGCGTCGAG
GGTGTGGCGG CGGCCAAGGC CGCTGGGCTC AAGGTGCTGG TCACCGACCA TCACCTGCCA
GGCCAGCAGT TGCCCGACGC AGACGCCATC ATCAACCCCA ATCAGCCGGG CTGTACGTTC
CCCAGCAAGT CGTTGGCCGG AGTAGGGGTG ATCTTCTACG TGCTGATGGC CCTGCGCGCG
CGACTGCGCA GCCTGGGCCG TTACGAGACG CAAGCACAGC CGAACATAGG CGAACTGCTC
GACCTGGTCG CGTTGGGCAG CGTTGCCGAC GTGGTGCCGC TGGATGCCAA CAACCGCATC
CTGGTGCACC AGGGCCTCGA GCGCATCCGC GCCGGTCGTG CCCGGCCAGG GCTGAAGGCG
ATTCTCGAAG TGGCCCGCCG CGATCACCGG CGTATCACCT CGACTGACCT GGGTTTCATC
CTCGGCCCAC GGCTGAACGC CGCCGGTCGC CTGGACGACA TGAGCCTGGG CATTGAATGC
CTGCTGTGCG AAGACGCGGC ACTGGCCCAG GACATGGCCC AGCAGCTAGA CGACCTGAAC
CAGGACCGCA AGTCCATCGA GCAGGGGATG CAGCGCGAAG CCCTGGCCCA GCTCAAGGAC
CTGCCGGTCG AGTCGATGCC GTATGGTCTG TGTTTGTTCG ATGCCGACTG GCACCAGGGT
GTAATCGGTA TTTTGGCGTC GCGCCTTAAA GAGCGTTATC ACCGTCCAAC CATTGCCTTT
GCCGATGCCG GCGAAGGCAT GCTGAAAGGC TCGGCGCGTT CGGTACCAGG GTTCCATATC
CGCGACGCGC TGGATGCCGT AGCGGCCCGC CACCCGCAAC TGATCAGCAA ATTCGGCGGC
CACGCCATGG CGGCGGGGTT GTCGTTGCCT GAAGGCAATT TCCAGGCGTT TGCCGAGGCG
TTCGACGAAG AAGTGCGGCG CCAGCTGCGC GAGGAAGACC TGACAGGCCG GCTGTTGTCT
GATGGCAGCC TGGCCGTGGA GGAATTCCAC CTCGACCTGG CCAAGGCCTT GCGCCATGCC
GGGCCGTGGG GCCAGCATTT CCCCGAGCCG CTGTTCCACG GCGTGTTCCA ACTGGTGGAG
CAGCGCGTGG TGGGCGAGCG GCACCTGAAG GTGGTGCTCA AGAGCGAGTG TGGTTCGGTG
CGACTGGATG GCATCGCCTT CGGCGTTGAC CGCGAAGTGT GGCCGAACCC GACCGTGCGC
TGGGTCGAAC TGGCGTACAA GCTGGATGTG AACGAGTTTC GTGGCAATGA AAGTGTGCAG
TTGATGATTG CCCACATGGA GCCACGCTGA
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| Protein sequence | MRIEPRPLPP TLPFLGNLPP LLTRLYAARG VQSEAELDKS LARLLPYQQL KGIEAGVDLL
VEALDQRQRI LIVGDFDADG ATASTVGVLG LRLLGAAHVD YLVPNRFEYG YGLTPEIVEV
ALQRQPQLLI TVDNGISSVE GVAAAKAAGL KVLVTDHHLP GQQLPDADAI INPNQPGCTF
PSKSLAGVGV IFYVLMALRA RLRSLGRYET QAQPNIGELL DLVALGSVAD VVPLDANNRI
LVHQGLERIR AGRARPGLKA ILEVARRDHR RITSTDLGFI LGPRLNAAGR LDDMSLGIEC
LLCEDAALAQ DMAQQLDDLN QDRKSIEQGM QREALAQLKD LPVESMPYGL CLFDADWHQG
VIGILASRLK ERYHRPTIAF ADAGEGMLKG SARSVPGFHI RDALDAVAAR HPQLISKFGG
HAMAAGLSLP EGNFQAFAEA FDEEVRRQLR EEDLTGRLLS DGSLAVEEFH LDLAKALRHA
GPWGQHFPEP LFHGVFQLVE QRVVGERHLK VVLKSECGSV RLDGIAFGVD REVWPNPTVR
WVELAYKLDV NEFRGNESVQ LMIAHMEPR
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