Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_1081 |
Symbol | |
ID | 5868840 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 1227618 |
End bp | 1228160 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641546180 |
Product | YaeQ family protein |
Protein accession | YP_001667325 |
Protein GI | 167032094 |
COG category | [S] Function unknown |
COG ID | [COG4681] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCCAGC CGTCCACCAC CTACAAGTTC GAATTGAATC TCACCGACCT TGACCGCAAC GTCTACGAAA GCGTCAAGCA GACCATCGCT CGCCACCCTT CGGAAACCGA AGAGCGTATG GCGGTTCGTC TGTTGGCGTA TGCGCTCTGG TACAACGAGA ACTTGTCGTT TGGCCGTGGC CTGTCGGATG TCGATGAGCC GGCGCTTTGG GAAAAGAGCC TGGACGATCG CGTGTTGCAT TGGATCGAAG TGGGCCAGCC AGACGCCGAC CGCCTGACCT GGTGCTCGCG CCGTACCGAA CGCACCAGCC TGCTGGCCTA CGGCAGCCTG CGGGTGTGGG AGGGCAAAGT GGTGAGCGCG GTCAAGAACC TGAAGAACCT GAGCATTGCC GCTGTACCGC AAGAGGTGCT GGAAACCTTG GCGACCGACA TGCCGCGCAG CATCAAGTGG GACGTGATGA TCAGCGAAGG CACGGTATTC GTCACCGACG ACCGTGGCCA GCATGAGGTA CAACTGCAGT GGCTGCTTGG TGAGCGTGGC TGA
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Protein sequence | MAQPSTTYKF ELNLTDLDRN VYESVKQTIA RHPSETEERM AVRLLAYALW YNENLSFGRG LSDVDEPALW EKSLDDRVLH WIEVGQPDAD RLTWCSRRTE RTSLLAYGSL RVWEGKVVSA VKNLKNLSIA AVPQEVLETL ATDMPRSIKW DVMISEGTVF VTDDRGQHEV QLQWLLGERG
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