Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_1071 |
Symbol | |
ID | 5868830 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 1217357 |
End bp | 1217764 |
Gene Length | 408 bp |
Protein Length | 135 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641546170 |
Product | thioesterase superfamily protein |
Protein accession | YP_001667315 |
Protein GI | 167032084 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1607] Acyl-CoA hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 0.54518 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTACCC GAGACCAGGA AATCCAGCGC CGCACCGAGC TGTCGGTGAC CCGCGTGACC AAGGCGGTGT TCCCCAACAC CACCAACCAC CACAACACCC TGTTCGGCGG CACCGCACTG GCCTGGATGG ACGAAGTGTC GTTCATCGCC GCCACGCGCT TCTGCCGCCT GCCGCTGGTG ACCGTTTCTA CCGACCGCAT CGACTTCAAG CACCCGATCC CGGCGGGCTC GATCGTCGAG CTGGTGGGGA CGGTGATCAA GGTCGGCAAT ACCAGCTTGC AGGTGCAGGT GGATGTGTTT GTCGAGAACA TGTACCTGGA CGGCCGTGAG CGGGCGATCC ATGGGGTGTT CAGCTTCGTC GCCATCGACG AGGACAAGCG CCCGGTGCCC GTGCTGCCAA GCGCCTGA
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Protein sequence | MTTRDQEIQR RTELSVTRVT KAVFPNTTNH HNTLFGGTAL AWMDEVSFIA ATRFCRLPLV TVSTDRIDFK HPIPAGSIVE LVGTVIKVGN TSLQVQVDVF VENMYLDGRE RAIHGVFSFV AIDEDKRPVP VLPSA
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