Gene PputGB1_1071 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_1071 
Symbol 
ID5868830 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp1217357 
End bp1217764 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content64% 
IMG OID641546170 
Productthioesterase superfamily protein 
Protein accessionYP_001667315 
Protein GI167032084 
COG category[I] Lipid transport and metabolism 
COG ID[COG1607] Acyl-CoA hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.54518 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTACCC GAGACCAGGA AATCCAGCGC CGCACCGAGC TGTCGGTGAC CCGCGTGACC 
AAGGCGGTGT TCCCCAACAC CACCAACCAC CACAACACCC TGTTCGGCGG CACCGCACTG
GCCTGGATGG ACGAAGTGTC GTTCATCGCC GCCACGCGCT TCTGCCGCCT GCCGCTGGTG
ACCGTTTCTA CCGACCGCAT CGACTTCAAG CACCCGATCC CGGCGGGCTC GATCGTCGAG
CTGGTGGGGA CGGTGATCAA GGTCGGCAAT ACCAGCTTGC AGGTGCAGGT GGATGTGTTT
GTCGAGAACA TGTACCTGGA CGGCCGTGAG CGGGCGATCC ATGGGGTGTT CAGCTTCGTC
GCCATCGACG AGGACAAGCG CCCGGTGCCC GTGCTGCCAA GCGCCTGA
 
Protein sequence
MTTRDQEIQR RTELSVTRVT KAVFPNTTNH HNTLFGGTAL AWMDEVSFIA ATRFCRLPLV 
TVSTDRIDFK HPIPAGSIVE LVGTVIKVGN TSLQVQVDVF VENMYLDGRE RAIHGVFSFV
AIDEDKRPVP VLPSA