Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_1053 |
Symbol | |
ID | 5868813 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 1199022 |
End bp | 1203548 |
Gene Length | 4527 bp |
Protein Length | 1508 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641546154 |
Product | filamentous haemagglutinin outer membrane protein |
Protein accession | YP_001667299 |
Protein GI | 167032068 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01901] filamentous haemagglutinin family N-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.21388 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAACAC TCTCGCAGTT ACCACCTATC CGCCCAAATA TCTTGCGCTG GTCCATCTTC CTCACGTTGC TGGGCCCCAG CGCCGCTCTG GCCCAGAACG GCCTGGATGC AACAGCCGGC CCGGCAGGCA CCCCGATCAT CCACAACGGC CATGGGGTAC CGGTCATCGA CATCGTGCCG CCCAACGCCA GCGGGCTGTC GCACAACCAG TTCATCGACT ACAACGTTGG CACCCCTGGC TTGGTGTTGA ACAACGCCAC CGAGGCCGGG CGGTCGCAGC TGGCCGGTGC CCTGGCGGCC AACCCGCAGT TTCAGGGCCA GGCCGCCTCG ACCATCCTCA ACGAAGTGGT CAGCCGCAAC GCCTCGTTGA TCGAAGGGCC ACAGGAAATC TTCGGGCGCC CGGCCGACTA CATCCTGGCC AACCCCAATG GCATCACCCT CAATGGCGGC AGCTTCATCA ACACCACCCG TGCTGGCTTC GTGGTGGGAA CCCCGGCTTT CGAAGAGCAG CAGCTCAAAT ACCTGGACAC ACTCACGGCC AGCGGCACCC TCCAGGTACT GGAAAATGGC CAGAGCAATG CCAGTGGCGC GCTCGAGCTG ATTGCACCGC GCGTGGACAG CAAAGGCCTG CTCACGGCCG GCGAAGCGCT CAACATCACG GTTGGTCGCA ACCGTGTGGA CAGTCGCAGT GGCGACGTTG TGGAACACCT GCCCAGCCCC TCTTCGAGCA TTGATGCCAG CCTGTTCGGT GCAATGCGCG CTGGGCGTAT CCGTGTGGTG AGCACTGCCG AAGGCGCGGG AGTGCGCATG GGGGCATCAC AGGTCATGGG CACCGAGGGC GTCGACATCC AATCGGCAGG CGGTTTGCAT ATCAGCGGCA AAGTCGACAA CCCCACCGAG CTACGTAGCG AGCGCGGTAC ACTGAAACTC ACCGCTGCCG ATGACCTGAT ACTTGATGCG GTCAACGGCC AGGCCGCAAG CATCGAAGCC CGCGCCGGCA AGAAGCTCAC ACTGGACGCC CAGACCCGCA AGCACATCGA GCACAACAAC GACAGCTGGA ACAAGAAGTT CTTGTTCATC ACCCGCGAAA CCTACAGCCG CAAAACCACC ACCACTCACC AACAGCAGCA GGGCAGTCAA TTGCAGGGCA GCGACAGCGT GCTGTTGCAG TCTGGCGAGG ACATGCGCCT GGCTGCAGCA AAGGTGGACG CAGGCAACGA GCTGATCGTC GACAGTGGCG CCGGCCTGGA CATCGTGGCC GGCATCGATA GCCAGCGCAC TGAAGAGCAG GTGCGCCACC GCAAGGATTT ATGGCGCGGT GACAGCGATA CCGACCAGCT CAAGGAAACC GCAAAGGGCA GTACGCTCGG CGCCAAGCAC ATGGCGATCA AGGCAAGCGG CAAGCTCGAT GTGCAAGGCA GCAGCCTGCA CAGCCGCGGC GATTTGGCCA TCCAGGCAAA ACAGGCAGAC ATCGGCACCA CCACATTGCA GGAACGCGGA ACCAAACGCG ACTATCGCGG CGACCTGGTA TCGGGCACCT TCTTTGGTGA TCGCCAAGGC AAGGACACCG AGGGCAAGGC CGTTGCAGGC AGCACGGTCG CCAGCGAGGG CAAGCTCACC GTGGCTGCCG AGCAGGTCGC TATCACCGGC AGCAGCGTGC ACGGCAAGCA GGACGCCGTG CTCTACAGCG AAAAAGGTTC GCTGGCCATC GAGGCAGACC ACGCCAGCAG CACCTCCACC AACCGCTCCA GCGACAGCAA ACTGTTCGGC CTGATTGGCA GCGAACACGA AGGTACAGAC CGCAAACAGC AGGTGCTGGT CAGCGACGTC AGCTCGGCCA GCAACCTGCG CCTGGCCAGT GCCGAAGAAT TGCGCATTCA GGGTGCCAAG GTCGAAGCGG GCAAACACCT GCAAGTGGAG GCCAAAGGCG ACCTGCTGAT TGGCAGTGCA CAATCGGTCG ATGAACGCGA AACCCGCGAC CAGCAACGCG GCTTCACGGC CAGCGCCAGG CAAACCCAGG AAGCCGAGGA TGGCAAGCCA GAATCCCGCC AGTACGCGGC TGGCGTGGCA TATGAGGTCG CCAACAGCAC CAGCAAGCAG CGCACCACCC ACCAGGTTGC CAGTGAGCTC AAGGGCGCCT CGGTGGGCAT GAACAGTGGC GCGCACCTGC AGGTAAAGGG CAGCAAGGTC CAGGCCACTG CCGGCGACCT CGACGTACAG GCTCAGGAAG TGACGCTGGG TGCGGCCCGT AATGAGCGTG ACGCGACCAC CACTACCACC CATAGCGGTG GCGGGTTGAC GGTAACCGGC GGCATCGACC GCTTGGGCAG TCTGTTCGAA GGCCATCACA ACCGTGAGGT GCAGACCGAG CGCGAGAGCA AGGTGCAGCG CAGCGCGTTG CAGGCCAGCG GCGATCTGAA ATTGCGCAGT GATGCACTGC TCACCGAGAC CGCGCACGTC GAGGCCGGCA ACTCCCTGCA GGTGACCGCC GAACGCATCG ATAACCGCGC GCTGCAGGAT ACCCAGGAAC ATGAACAAAG CCGCGACAAC TGGTCTGCCA GCCTGGGCGC CAGTGTCGAG TACCGCGACC TTACCCGCCC CATCGAACGC CTGGTGCTGG GTGAGGAAGC CGCACGCTTC CAGCAAGCCT CGCCCGAAGA TGCCATGGCG CCACCCAGCA TCGGTGCCGA CATGACCGTC GAACACCTCA AGCGCCTGGA AAACCAGCGT CGCAGCTTGG CTCGGGTGAG CGAGTTTTCC GGGGCCAAGG TCGAGGTCAA GGCCGACACC CTCGCAGACC AGGGAACAGC TTGGCAGGCC AACGCCGGCG CGCTGCAGAT CGAGGCGCAG CAGCACCAGA TGCACGCGGC CGAGAACACC CAGGAAGTGA CCGTGCAACG CCTGGCCTAT GGCGGCGACG TGCGCCTGGA CACCAGCACC GGCGAGGACC TGAACGTACG CGCCGCTGGC CAGGGAGGGT CGCTGGAAAG CAAGGATATC GGCAGCACCG CCGTGCCCGG CAGCCTGTAC GGGCAACAGG GTATCCAGGT ACAGCTGGGC AGCGATGGGC GCTACGAAGG GGCCCGCATC GATGGCGGCG AAGGTAGCGT GGTCATGCAC AGTGCTGGCT CGCTAACCTT GTCACAGGCG ACCGACCAGG CCGAACAACA GGCACGCCAG CTCGATGGCA ATGCCTGGGC CAAAGTTGGC AACCGTCCAG GCAGCACCGG CGTCAATGGC CGTGGCTATC TCGACCACAG TCAAACGCTG AGCACGCAGA GCACGGCTCA AGTGGCACAA GTCGACGCCA AGGGCGAGGT GCGACTGACC AGCGGTGCCG ACCTGCTGCT CGAAGGTACC CGCATTGGCA GCCGCGAGGC CAAGGTTGGC GACATCCTGG TGCAGAGCGG CGGCCAACTG CGGGTCAAGG CGGCCAGCAA TACCCAGCAA GCCACGGGCG CCAAGCTGGG CGGCGGCCTG GAGCTGGCGG TCAAGGCAGG CACGACCAAG GGGGGAGCAT TGGGTGGCCA CTTCAGCCAC GGCAAACAGG AAGAAAATGC ACACCAGGCG ATTGATGCCC AGTTTGCCAG CAACGGCGCA CTGACCCTGA GCAGCAACGC CCGCGAGGAT ATCGCCCTGC ACCTGCAAGG CCTTCAGGCC TCGGCCGAAC GAATGACCCT CGACGCTTCG AACGGCGGCA TGCTGGTGGA AGCCTCTTCC AACCAGGAGC GACGCGACAA CCTCGACATC ACCGCCGGCG CCGGTTTCGA CATGGCCAAG GGCGCGCTGG ATACCCGCGG CCTGCATGGC CGCCTCAAGG TAGAGTTCGA CAAGCGCGAC AACCTCACCT GGAATGCCAA TGACCTGCGC GCCGAGCGCA TCGACCTGCA AAGCCGCGGC GATACCCGCA TCGAAGGCGC CACCCTGGTA GCGGGGCATA TTGGTGGCGT GATCGACGGT GACCTGCGTA TCGCCAGCCG CAAGGACCGC GTCGACACCC TGAGCGTCAA AGGGGATGCC AGGCTGAGCC AGGAGAAAAA CCCACAGGGC TATGTCAACG CGGCCACTTC GGTGGCCGGG CCTCTGGGGG GCAAGGTCGA GAAAAAAGCC GGCTCCGCCT TGAGCAAGGC AGACCCAGGG CTCTCGCCGA CCCTAAGCCT CGACGTTTCG CACGTGCAGC GTGACAGCGT GGCCCATCAG GCCACGCTCA AAGGCAGCGA TGGTATCGAC CTGCAGGTGG GTGGCAACGC TCATCTGGTG GGGGCACGTT TGCAGTCGGC CAGGGGCGCC GTGGGGCTCG ACGCCGACTC GATCACTCAA GAAACGCTGA GCGGTAATGA CTATCGCCGG GACGTATCGA TCGATGCGTC CAACTCACCG GTGGACCTGG GCACGGCAAT CGCCGATATG GCCAAGGGCA AAGGGGCAGC GGATGGCGAG AATGCGCTGG ACCTTGGGTT GTTGAGAACC AGTGGGCATA GCCGCAGCGA GCAATGGGCT TCGAGTGTGC AGGGCAAGAA GCAATAG
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Protein sequence | MQTLSQLPPI RPNILRWSIF LTLLGPSAAL AQNGLDATAG PAGTPIIHNG HGVPVIDIVP PNASGLSHNQ FIDYNVGTPG LVLNNATEAG RSQLAGALAA NPQFQGQAAS TILNEVVSRN ASLIEGPQEI FGRPADYILA NPNGITLNGG SFINTTRAGF VVGTPAFEEQ QLKYLDTLTA SGTLQVLENG QSNASGALEL IAPRVDSKGL LTAGEALNIT VGRNRVDSRS GDVVEHLPSP SSSIDASLFG AMRAGRIRVV STAEGAGVRM GASQVMGTEG VDIQSAGGLH ISGKVDNPTE LRSERGTLKL TAADDLILDA VNGQAASIEA RAGKKLTLDA QTRKHIEHNN DSWNKKFLFI TRETYSRKTT TTHQQQQGSQ LQGSDSVLLQ SGEDMRLAAA KVDAGNELIV DSGAGLDIVA GIDSQRTEEQ VRHRKDLWRG DSDTDQLKET AKGSTLGAKH MAIKASGKLD VQGSSLHSRG DLAIQAKQAD IGTTTLQERG TKRDYRGDLV SGTFFGDRQG KDTEGKAVAG STVASEGKLT VAAEQVAITG SSVHGKQDAV LYSEKGSLAI EADHASSTST NRSSDSKLFG LIGSEHEGTD RKQQVLVSDV SSASNLRLAS AEELRIQGAK VEAGKHLQVE AKGDLLIGSA QSVDERETRD QQRGFTASAR QTQEAEDGKP ESRQYAAGVA YEVANSTSKQ RTTHQVASEL KGASVGMNSG AHLQVKGSKV QATAGDLDVQ AQEVTLGAAR NERDATTTTT HSGGGLTVTG GIDRLGSLFE GHHNREVQTE RESKVQRSAL QASGDLKLRS DALLTETAHV EAGNSLQVTA ERIDNRALQD TQEHEQSRDN WSASLGASVE YRDLTRPIER LVLGEEAARF QQASPEDAMA PPSIGADMTV EHLKRLENQR RSLARVSEFS GAKVEVKADT LADQGTAWQA NAGALQIEAQ QHQMHAAENT QEVTVQRLAY GGDVRLDTST GEDLNVRAAG QGGSLESKDI GSTAVPGSLY GQQGIQVQLG SDGRYEGARI DGGEGSVVMH SAGSLTLSQA TDQAEQQARQ LDGNAWAKVG NRPGSTGVNG RGYLDHSQTL STQSTAQVAQ VDAKGEVRLT SGADLLLEGT RIGSREAKVG DILVQSGGQL RVKAASNTQQ ATGAKLGGGL ELAVKAGTTK GGALGGHFSH GKQEENAHQA IDAQFASNGA LTLSSNARED IALHLQGLQA SAERMTLDAS NGGMLVEASS NQERRDNLDI TAGAGFDMAK GALDTRGLHG RLKVEFDKRD NLTWNANDLR AERIDLQSRG DTRIEGATLV AGHIGGVIDG DLRIASRKDR VDTLSVKGDA RLSQEKNPQG YVNAATSVAG PLGGKVEKKA GSALSKADPG LSPTLSLDVS HVQRDSVAHQ ATLKGSDGID LQVGGNAHLV GARLQSARGA VGLDADSITQ ETLSGNDYRR DVSIDASNSP VDLGTAIADM AKGKGAADGE NALDLGLLRT SGHSRSEQWA SSVQGKKQ
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